8KI8

structure of Tomato spotted wilt virus L protein binding to 5'vRNA

• PDB DOI: https://doi.org/10.2210/pdb8KI8/pdb
• NAKB: 8KI8
• EM Map EMD-37254: EMDB EMDataResource

• Classification: VIRAL PROTEIN/RNA
• Organism(s): Orthotospovirus tomatomaculae, synthetic construct
• Expression System: Spodoptera frugiperda
• Mutation(s): No 


• Deposited: 2023-08-23 Released: 2024-09-25 
• Deposition Author(s): Cao, L., Wang, X.
• Funding Organization(s): Not funded

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 3.20 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

structure of Tomato spotted wilt virus L protein

Cao, L., Wang, X.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: electron microscopy

Macromolecule Content

• Total Structure Weight: 207.47 kDa 
• Atom Count: 13,264 
• Modelled Residue Count: 1,631 
• Deposited Residue Count: 1,785 
• Unique protein chains: 1
• Unique nucleic acid chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
RNA-directed RNA polymerase L	A	1,775	Orthotospovirus tomatomaculae	Mutation(s): 0  EC: 2.7.7.48
UniProt
Find proteins for A0A7G8JUR3 (Tomato spotted wilt virus) Explore A0A7G8JUR3  Go to UniProtKB:  A0A7G8JUR3

Entity ID: 2
Molecule	Chains	Length	Organism	Image
RNA (5'-R(P*AP*GP*AP*GP*CP*AP*AP*UP*CP*A)-3')	B [auth E]	10	synthetic construct

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 3.20 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-09-25 
Deposition Author(s): Cao, L., Wang, X.

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Funding Organization	Location	Grant Number
Not funded		--

Revision History  

• Version 1.0: 2024-09-25
  Type: Initial release