Characterization of two novel antibody fragments for obtaining cryo-EM structures of GPCR-G protein complexes
Pamula, F., Tejero, O., Muehle, J., Thoma, R., Schertler, G.F.X., Marino, J., Tsai, C.-J.To be published.
Experimental Data Snapshot
Starting Models: experimental, in silico
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wwPDB Validation 3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Rhodopsin | A [auth R] | 348 | Bos taurus | Mutation(s): 3 Gene Names: RHO | ![]() |
UniProt | |||||
Find proteins for P02699 (Bos taurus) Explore P02699 Go to UniProtKB: P02699 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P02699 | ||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Guanine nucleotide-binding protein G(i) subunit alpha-1 | B [auth A] | 376 | Homo sapiens | Mutation(s): 0 Gene Names: GNAI1 EC: 3.6.5 | ![]() |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P63096 (Homo sapiens) Explore P63096 Go to UniProtKB: P63096 | |||||
PHAROS: P63096 GTEx: ENSG00000127955 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P63096 | ||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 | C [auth B] | 340 | Bos taurus | Mutation(s): 0 | ![]() |
UniProt | |||||
Find proteins for P62871 (Bos taurus) Explore P62871 Go to UniProtKB: P62871 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P62871 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 4 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Guanine nucleotide-binding protein G(T) subunit gamma-T1 | D [auth G] | 74 | Bos taurus | Mutation(s): 0 | ![]() |
UniProt | |||||
Find proteins for P02698 (Bos taurus) Explore P02698 Go to UniProtKB: P02698 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P02698 | ||||
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Entity ID: 5 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
single-chain Fv 16 | E [auth S] | 259 | Mus musculus | Mutation(s): 0 | ![]() |
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Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
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Entity ID: 6 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Immunoglobin G heavy chain FAB fragment | F [auth H] | 262 | Mus musculus | Mutation(s): 0 | ![]() |
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
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Entity ID: 7 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Immunoglobin G light chain | G [auth L] | 239 | Mus musculus | Mutation(s): 0 | ![]() |
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Task | Software Package | Version |
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MODEL REFINEMENT | PHENIX | 1.20.1-4487 |
RECONSTRUCTION | RELION | 3.1 |
Funding Organization | Location | Grant Number |
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Swiss National Science Foundation | Switzerland | 173335 |
Swiss National Science Foundation | Switzerland | 153145 |
Swiss National Science Foundation | Switzerland | 192760 |
European Research Council (ERC) | European Union | 951644 |