9L8T | pdb_00009l8t

The apo structure (State 1) of African Swine Fever Virus DNA polymerase

• PDB DOI: https://doi.org/10.2210/pdb9L8T/pdb
• EM Map EMD-62890: EMDB EMDataResource

• Classification: DNA BINDING PROTEIN
• Organism(s): African swine fever virus
• Expression System: Eukaryota
• Mutation(s): No 


• Deposited: 2024-12-28 Released: 2025-12-31 
• Deposition Author(s): Hu, Z., Yan, R.
• Funding Organization(s): National Natural Science Foundation of China (NSFC)

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 2.92 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

The apo structure (State 1) of African Swine Fever Virus DNA polymerase

Yan, R., Hu, Z.

(2025) iScience 

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by (software)

Biological Assembly Evidence: electron microscopy

Macromolecule Content 

• Total Structure Weight: 115.26 kDa 
• Atom Count: 8,008 
• Modeled Residue Count: 982 
• Deposited Residue Count: 993 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
DNA polymerase	A	993	African swine fever virus	Mutation(s): 0  EC: 2.7.7.7
UniProt
Find proteins for A0A7D5JBM0 (African swine fever virus) Explore A0A7D5JBM0  Go to UniProtKB:  A0A7D5JBM0

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 2.92 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

EM Software:

Task	Software Package	Version
RECONSTRUCTION	cryoSPARC

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2025-12-31 
Deposition Author(s): Hu, Z., Yan, R.

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Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	--

Revision History  

• Version 1.0: 2025-12-31
  Type: Initial release