CRYSTAL STRUCTURE OF THE ASYMMETRIC CHAPERONIN COMPLEX GROEL/GROES/(ADP)7
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| P | SCOP2B Superfamily | GroES-like | 8002348 | 3000002 | SCOP2B (2022-06-29) |
| R | SCOP2B Superfamily | GroES-like | 8002348 | 3000002 | SCOP2B (2022-06-29) |
| S | SCOP2B Superfamily | GroES-like | 8002348 | 3000002 | SCOP2B (2022-06-29) |
| U | SCOP2B Superfamily | GroES-like | 8002348 | 3000002 | SCOP2B (2022-06-29) |
| T | SCOP2B Superfamily | GroES-like | 8002348 | 3000002 | SCOP2B (2022-06-29) |
| Q | SCOP2B Superfamily | GroES-like | 8002348 | 3000002 | SCOP2B (2022-06-29) |
| O | SCOP2 Family | GroES chaperonin-like | 8002346 | 4000251 | SCOP2 (2022-06-29) |
| O | SCOP2 Superfamily | GroES-like | 8002348 | 3000002 | SCOP2 (2022-06-29) |
| N | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| N | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| N | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| N | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| N | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| P | Cpn10 | e1aonP1 | A: alpha bundles | X: Cloacin translocation domain | H: beta-Prism I | T: beta-Prism I | F: Cpn10 | ECOD (develop294) |
| R | Cpn10 | e1aonR1 | A: alpha bundles | X: Cloacin translocation domain | H: beta-Prism I | T: beta-Prism I | F: Cpn10 | ECOD (develop294) |
| S | Cpn10 | e1aonS1 | A: alpha bundles | X: Cloacin translocation domain | H: beta-Prism I | T: beta-Prism I | F: Cpn10 | ECOD (develop294) |
| U | Cpn10 | e1aonU1 | A: alpha bundles | X: Cloacin translocation domain | H: beta-Prism I | T: beta-Prism I | F: Cpn10 | ECOD (develop294) |
| T | Cpn10 | e1aonT1 | A: alpha bundles | X: Cloacin translocation domain | H: beta-Prism I | T: beta-Prism I | F: Cpn10 | ECOD (develop294) |
| Q | Cpn10 | e1aonQ1 | A: alpha bundles | X: Cloacin translocation domain | H: beta-Prism I | T: beta-Prism I | F: Cpn10 | ECOD (develop294) |
| O | Cpn10 | e1aonO1 | A: alpha bundles | X: Cloacin translocation domain | H: beta-Prism I | T: beta-Prism I | F: Cpn10 | ECOD (develop294) |
| N | Orbi_VP7 | e1aonN1 | A: alpha bundles | X: EGF-like | H: Flavivirus capsid protein C | T: Flavivirus capsid protein C | F: Orbi_VP7 | ECOD (develop294) |
| N | DUF3195_C | e1aonN2 | A: alpha bundles | X: EGF-like | H: LDL receptor-like module | T: LDL receptor-like module | F: DUF3195_C | ECOD (develop294) |
| N | Glyco_hydro_20b | e1aonN3 | A: alpha bundles | X: HTH | H: HTH | T: winged helix domain | F: Glyco_hydro_20b | ECOD (develop294) |
| M | Orbi_VP7 | e1aonM1 | A: alpha bundles | X: EGF-like | H: Flavivirus capsid protein C | T: Flavivirus capsid protein C | F: Orbi_VP7 | ECOD (develop294) |
| M | DUF3195_C | e1aonM2 | A: alpha bundles | X: EGF-like | H: LDL receptor-like module | T: LDL receptor-like module | F: DUF3195_C | ECOD (develop294) |
| M | Glyco_hydro_20b | e1aonM3 | A: alpha bundles | X: HTH | H: HTH | T: winged helix domain | F: Glyco_hydro_20b | ECOD (develop294) |
| L | Orbi_VP7 | e1aonL1 | A: alpha bundles | X: EGF-like | H: Flavivirus capsid protein C | T: Flavivirus capsid protein C | F: Orbi_VP7 | ECOD (develop294) |
| L | DUF3195_C | e1aonL2 | A: alpha bundles | X: EGF-like | H: LDL receptor-like module | T: LDL receptor-like module | F: DUF3195_C | ECOD (develop294) |
| L | Glyco_hydro_20b | e1aonL3 | A: alpha bundles | X: HTH | H: HTH | T: winged helix domain | F: Glyco_hydro_20b | ECOD (develop294) |
| K | Orbi_VP7 | e1aonK1 | A: alpha bundles | X: EGF-like | H: Flavivirus capsid protein C | T: Flavivirus capsid protein C | F: Orbi_VP7 | ECOD (develop294) |
| K | DUF3195_C | e1aonK2 | A: alpha bundles | X: EGF-like | H: LDL receptor-like module | T: LDL receptor-like module | F: DUF3195_C | ECOD (develop294) |
| K | Glyco_hydro_20b | e1aonK3 | A: alpha bundles | X: HTH | H: HTH | T: winged helix domain | F: Glyco_hydro_20b | ECOD (develop294) |
| J | Orbi_VP7 | e1aonJ1 | A: alpha bundles | X: EGF-like | H: Flavivirus capsid protein C | T: Flavivirus capsid protein C | F: Orbi_VP7 | ECOD (develop294) |
| J | DUF3195_C | e1aonJ2 | A: alpha bundles | X: EGF-like | H: LDL receptor-like module | T: LDL receptor-like module | F: DUF3195_C | ECOD (develop294) |
| J | Cpn60_TCP1 | e1aonJ3 | A: alpha bundles | X: HTH | H: HTH | T: winged helix domain | F: Cpn60_TCP1 | ECOD (develop294) |
| I | Orbi_VP7 | e1aonI1 | A: alpha bundles | X: EGF-like | H: Flavivirus capsid protein C | T: Flavivirus capsid protein C | F: Orbi_VP7 | ECOD (develop294) |
| I | DUF3195_C | e1aonI2 | A: alpha bundles | X: EGF-like | H: LDL receptor-like module | T: LDL receptor-like module | F: DUF3195_C | ECOD (develop294) |
| I | Glyco_hydro_20b | e1aonI3 | A: alpha bundles | X: HTH | H: HTH | T: winged helix domain | F: Glyco_hydro_20b | ECOD (develop294) |
| H | Orbi_VP7 | e1aonH1 | A: alpha bundles | X: EGF-like | H: Flavivirus capsid protein C | T: Flavivirus capsid protein C | F: Orbi_VP7 | ECOD (develop294) |
| H | DUF3195_C | e1aonH2 | A: alpha bundles | X: EGF-like | H: LDL receptor-like module | T: LDL receptor-like module | F: DUF3195_C | ECOD (develop294) |
| H | Glyco_hydro_20b | e1aonH3 | A: alpha bundles | X: HTH | H: HTH | T: winged helix domain | F: Glyco_hydro_20b | ECOD (develop294) |
| G | Orbi_VP7 | e1aonG1 | A: alpha bundles | X: EGF-like | H: Flavivirus capsid protein C | T: Flavivirus capsid protein C | F: Orbi_VP7 | ECOD (develop294) |
| G | DUF3195_C | e1aonG2 | A: alpha bundles | X: EGF-like | H: LDL receptor-like module | T: LDL receptor-like module | F: DUF3195_C | ECOD (develop294) |
| G | Glyco_hydro_20b | e1aonG3 | A: alpha bundles | X: HTH | H: HTH | T: winged helix domain | F: Glyco_hydro_20b | ECOD (develop294) |
| F | Orbi_VP7 | e1aonF1 | A: alpha bundles | X: EGF-like | H: Flavivirus capsid protein C | T: Flavivirus capsid protein C | F: Orbi_VP7 | ECOD (develop294) |
| F | DUF3195_C | e1aonF2 | A: alpha bundles | X: EGF-like | H: LDL receptor-like module | T: LDL receptor-like module | F: DUF3195_C | ECOD (develop294) |
| F | Glyco_hydro_20b | e1aonF3 | A: alpha bundles | X: HTH | H: HTH | T: winged helix domain | F: Glyco_hydro_20b | ECOD (develop294) |
| E | Orbi_VP7 | e1aonE1 | A: alpha bundles | X: EGF-like | H: Flavivirus capsid protein C | T: Flavivirus capsid protein C | F: Orbi_VP7 | ECOD (develop294) |
| E | DUF3195_C | e1aonE2 | A: alpha bundles | X: EGF-like | H: LDL receptor-like module | T: LDL receptor-like module | F: DUF3195_C | ECOD (develop294) |
| E | Glyco_hydro_20b | e1aonE3 | A: alpha bundles | X: HTH | H: HTH | T: winged helix domain | F: Glyco_hydro_20b | ECOD (develop294) |
| D | Orbi_VP7 | e1aonD1 | A: alpha bundles | X: EGF-like | H: Flavivirus capsid protein C | T: Flavivirus capsid protein C | F: Orbi_VP7 | ECOD (develop294) |
| D | DUF3195_C | e1aonD2 | A: alpha bundles | X: EGF-like | H: LDL receptor-like module | T: LDL receptor-like module | F: DUF3195_C | ECOD (develop294) |
| D | Glyco_hydro_20b | e1aonD3 | A: alpha bundles | X: HTH | H: HTH | T: winged helix domain | F: Glyco_hydro_20b | ECOD (develop294) |
| C | Orbi_VP7 | e1aonC1 | A: alpha bundles | X: EGF-like | H: Flavivirus capsid protein C | T: Flavivirus capsid protein C | F: Orbi_VP7 | ECOD (develop294) |
| C | DUF3195_C | e1aonC2 | A: alpha bundles | X: EGF-like | H: LDL receptor-like module | T: LDL receptor-like module | F: DUF3195_C | ECOD (develop294) |
| C | Cpn60_TCP1 | e1aonC3 | A: alpha bundles | X: HTH | H: HTH | T: winged helix domain | F: Cpn60_TCP1 | ECOD (develop294) |
| B | Orbi_VP7 | e1aonB1 | A: alpha bundles | X: EGF-like | H: Flavivirus capsid protein C | T: Flavivirus capsid protein C | F: Orbi_VP7 | ECOD (develop294) |
| B | DUF3195_C | e1aonB2 | A: alpha bundles | X: EGF-like | H: LDL receptor-like module | T: LDL receptor-like module | F: DUF3195_C | ECOD (develop294) |
| B | Glyco_hydro_20b | e1aonB3 | A: alpha bundles | X: HTH | H: HTH | T: winged helix domain | F: Glyco_hydro_20b | ECOD (develop294) |
| A | Orbi_VP7 | e1aonA1 | A: alpha bundles | X: EGF-like | H: Flavivirus capsid protein C | T: Flavivirus capsid protein C | F: Orbi_VP7 | ECOD (develop294) |
| A | DUF3195_C | e1aonA2 | A: alpha bundles | X: EGF-like | H: LDL receptor-like module | T: LDL receptor-like module | F: DUF3195_C | ECOD (develop294) |
| A | Glyco_hydro_20b | e1aonA3 | A: alpha bundles | X: HTH | H: HTH | T: winged helix domain | F: Glyco_hydro_20b | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00166 | Chaperonin 10 Kd subunit (Cpn10) | Chaperonin 10 Kd subunit | This family contains GroES and Gp31-like chaperonins. Gp31 is a functional co-chaperonin that is required for the folding and assembly of Gp23, a major capsid protein, during phage morphogenesis [1]. | Domain | |
| PF00118 | TCP-1/cpn60 chaperonin family (Cpn60_TCP1) | TCP-1/cpn60 chaperonin family | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR018369 | Chaperonin GroES, conserved site | Conserved Site | |
| IPR011032 | GroES-like superfamily | Homologous Superfamily | |
| IPR037124 | GroES chaperonin superfamily | Homologous Superfamily | |
| IPR020818 | GroES chaperonin family | Family | |
| IPR027413 | GroEL-like equatorial domain superfamily | Homologous Superfamily | |
| IPR027410 | TCP-1-like chaperonin intermediate domain superfamily | Homologous Superfamily | |
| IPR001844 | Chaperonin Cpn60/GroEL | Family | |
| IPR018370 | Chaperonin Cpn60, conserved site | Conserved Site | |
| IPR027409 | GroEL-like apical domain superfamily | Homologous Superfamily | |
| IPR002423 | Chaperonin Cpn60/GroEL/TCP-1 family | Family |














