1AVZ | pdb_00001avz

V-1 NEF PROTEIN IN COMPLEX WITH WILD TYPE FYN SH3 DOMAIN


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilySH3-domain 8041562 3000153 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ANTP_transf_2, PAP_NTPasee1avzA1 A: alpha bundlesX: EGF-likeH: LDL receptor-like moduleT: LDL receptor-like moduleF: NTP_transf_2, PAP_NTPaseECOD (develop294)
BNTP_transf_2, PAP_NTPasee1avzB1 A: alpha bundlesX: EGF-likeH: LDL receptor-like moduleT: LDL receptor-like moduleF: NTP_transf_2, PAP_NTPaseECOD (develop294)
CKOW, Ribosomal_L26e1avzC1 A: alpha bundlesX: Cloacin translocation domainH: beta-Prism IT: beta-Prism IF: KOW, Ribosomal_L26ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.62.10 Alpha Beta 2-Layer Sandwich Nef Regulatory Factor Nef Regulatory FactorCATH (4.3.0)
B3.30.62.10 Alpha Beta 2-Layer Sandwich Nef Regulatory Factor Nef Regulatory FactorCATH (4.3.0)
C2.30.30.40 Mainly Beta Roll SH3 type barrels. SH3 DomainsCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00018SH3 domain (SH3_1)SH3 domainSH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase Swiss:P12931. The structure is a partly opened beta barrel. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
NEGATIVE FACTOR
FYN TYROSINE KINASE

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP06241