1BSZ | pdb_00001bsz

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d1bszb_	Alpha and beta proteins (a+b)	Peptide deformylase	Peptide deformylase	Peptide deformylase	Peptide deformylase	(Escherichia coli K-12 ) [TaxId: 83333 ],	SCOPe (2.08)
C	d1bszc_	Alpha and beta proteins (a+b)	Peptide deformylase	Peptide deformylase	Peptide deformylase	Peptide deformylase	(Escherichia coli K-12 ) [TaxId: 83333 ],	SCOPe (2.08)
A	d1bsza_	Alpha and beta proteins (a+b)	Peptide deformylase	Peptide deformylase	Peptide deformylase	Peptide deformylase	(Escherichia coli K-12 ) [TaxId: 83333 ],	SCOPe (2.08)

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Peptide deformylase	8033706	3001229	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Peptide deformylase	8033706	3001229	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Peptide deformylase	8033706	3001229	SCOP2B (2022-06-29)

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Biotin_carb_C	e1bszB1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: Biotin_carb_C	ECOD (v294.1)
C	Biotin_carb_C	e1bszC1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: Biotin_carb_C	ECOD (v294.1)
A	Biotin_carb_C	e1bszA1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: Biotin_carb_C	ECOD (v294.1)

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.90.45.10	Alpha Beta	Alpha-Beta Complex	Peptide Deformylase	Peptide deformylase	CATH (4.3.0)
C	3.90.45.10	Alpha Beta	Alpha-Beta Complex	Peptide Deformylase	Peptide deformylase	CATH (4.3.0)
A	3.90.45.10	Alpha Beta	Alpha-Beta Complex	Peptide Deformylase	Peptide deformylase	CATH (4.3.0)

Chains	Accession	Name	Description	Comments	Source
A, B, C	PF01327	Polypeptide deformylase (Pep_deformylase)	Polypeptide deformylase		Domain

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	PROTEIN (PEPTIDE DEFORMYLASE)	peptide deformylase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides hydrolase activity catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds cation binding transition metal ion binding iron ion binding ion binding binding ferrous iron binding metal ion binding small molecule binding zinc ion binding peptide deformylase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides hydrolase activity catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds cation binding transition metal ion binding iron ion binding ion binding binding ferrous iron binding metal ion binding small molecule binding zinc ion binding ribonucleoprotein complex binding protein-containing complex binding ribosome binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

Chains	Accession	Name	Type
A, B, C	IPR023635	Peptide deformylase	Family
A, B, C	IPR036821	Peptide deformylase superfamily	Homologous Superfamily

Chains	Enzyme Name	Description	Catalytic Residues
C	peptide deformylase M-CSA #98	In prokaryotes, proteins are synthesised with an N-terminal formylmethionine which is removed by peptide deformylase. Eukaryotes do not use this enzyme, so it represents a potential drug target for the treatment of bacterial infections.	Defined by 7 residues: GLY:C-45 [auth C-1045]GLN:C-50 [auth C-1050]CYS:C-90 [auth C-1090]LEU:C-91 [auth C-1091]HIS:C-132 [auth C-1132]GLU:C-133 [auth C-1133]HIS:C-136 [auth C-1136] \| Explore in 3D: M-CSA Motif Definition Search M-CSA Motif EC: 3.5.1.31 (PDB Primary Data) Search M-CSA Motif + EC 3.5.1.31 EC: 3.5.1.88 (UniProt) Search M-CSA Motif + EC 3.5.1.88

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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