1DQG | pdb_00001dqg

CRYSTAL STRUCTURE OF THE CYSTEINE RICH DOMAIN OF MANNOSE RECEPTOR


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1dqga_ All beta proteins beta-Trefoil Ricin B-like lectins Cysteine rich domain Mannose receptor house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyCysteine rich domain 8029649 4002013 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyRicin B-like lectins 8042028 3000678 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ARicin_B_lectine1dqgA1 A: beta duplicates or obligate multimersX: beta-Trefoil (From Topology)H: beta-Trefoil (From Topology)T: beta-TrefoilF: Ricin_B_lectinECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.80.10.50 Mainly Beta Trefoil Trefoil (Acidic Fibroblast Growth Factor, subunit A) CATH (4.2.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF24562MRC2-like, N-terminal cysteine-rich domain (CysR_MRC2_N)MRC2-like, N-terminal cysteine-rich domainThis cysteine-rich domain is found at the N-terminal end of human C-type mannose receptor 2 (MRC2) and similar proteins from vertebrates. MRC2 internalises glycosylated ligands from the extracellular space for release in an endosomal compartment and ...This cysteine-rich domain is found at the N-terminal end of human C-type mannose receptor 2 (MRC2) and similar proteins from vertebrates. MRC2 internalises glycosylated ligands from the extracellular space for release in an endosomal compartment and may play a role as endocytotic lectin receptor. It may also be involved in cancer progression as well as in other chronic tissue destructive diseases acting on collagen turnover. This domain is organised into two regions: the N-terminal folds into two lobes similarly to the canonical beta-trefoil structure. The predicted third lobe folds into an alpha-helix followed by a long flexible loop and a beta-strand [1-6].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
MANNOSE RECEPTOR