1E0F
Crystal structure of the human alpha-thrombin-haemadin complex: an exosite II-binding inhibitor
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
D | SCOP2B Superfamily | Trypsin-like serine proteases | 8042154 | 3000114 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Trypsin-like serine proteases | 8042154 | 3000114 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Trypsin-like serine proteases | 8042154 | 3000114 | SCOP2B (2022-06-29) |
G [auth I] | SCOP2 Family | Hirudin-like | 8026012 | 4003252 | SCOP2 (2022-06-29) |
G [auth I] | SCOP2 Superfamily | Leech antihemostatic proteins | 8038391 | 3000489 | SCOP2 (2022-06-29) |
H [auth J] | SCOP2B Superfamily | Leech antihemostatic proteins | 8038391 | 3000489 | SCOP2B (2022-06-29) |
I [auth K] | SCOP2B Superfamily | Leech antihemostatic proteins | 8038391 | 3000489 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
G [auth I] | Haemadin | e1e0fI1 | A: few secondary structure elements | X: Leech antihemostatic protein (From Topology) | H: Leech antihemostatic protein (From Topology) | T: Leech antihemostatic protein | F: Haemadin | ECOD (1.6) |
H [auth J] | Haemadin | e1e0fJ1 | A: few secondary structure elements | X: Leech antihemostatic protein (From Topology) | H: Leech antihemostatic protein (From Topology) | T: Leech antihemostatic protein | F: Haemadin | ECOD (1.6) |
I [auth K] | Haemadin | e1e0fK1 | A: few secondary structure elements | X: Leech antihemostatic protein (From Topology) | H: Leech antihemostatic protein (From Topology) | T: Leech antihemostatic protein | F: Haemadin | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
D | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (4.3.0) |
E | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (4.3.0) |
F | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (4.3.0) |
G [auth I] | 2.70.10.10 | Mainly Beta | Distorted Sandwich | Thrombin Inhibitor (Hirudin) | Chain I | CATH (4.3.0) |
H [auth J] | 2.70.10.10 | Mainly Beta | Distorted Sandwich | Thrombin Inhibitor (Hirudin) | Chain I | CATH (4.3.0) |
I [auth K] | 2.70.10.10 | Mainly Beta | Distorted Sandwich | Thrombin Inhibitor (Hirudin) | Chain I | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09396 | Thrombin light chain (Thrombin_light) | Thrombin light chain | Thrombin is an enzyme that cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII. Prothrombin is activated on the surface of a phospholipid membrane where factor Xa removes the activation peptide and cleave ... | Domain | |
PF00089 | Trypsin (Trypsin) | Trypsin | - | Domain | |
G [auth I], H [auth J], I [auth K] | PF09065 | Haemadin (Haemadin) | Haemadin | Members of this family adopt a secondary structure consisting of five short beta-strands (beta1-beta5), which are arranged in two antiparallel distorted sheets formed by strands beta1-beta4-beta5 and beta2-beta3 facing each other. This beta-sandwich ... | Domain |