1E8S
Alu domain of the mammalian SRP (potential Alu retroposition intermediate)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1e8sa_ | Alpha and beta proteins (a+b) | Signal recognition particle alu RNA binding heterodimer, SRP9/14 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 | Signal recognition particle 9KDa protein, SRP9 | HUMAN (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d1e8sb_ | Alpha and beta proteins (a+b) | Signal recognition particle alu RNA binding heterodimer, SRP9/14 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 | Signal recognition particle 14KDa protein, SRP14 | HUMAN (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Signal recognition particle alu RNA binding heterodimer, SRP9/14 | 8035086 | 3000976 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Signal recognition particle alu RNA binding heterodimer, SRP9/14 | 8035087 | 3000976 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | SRP9-21 | e1e8sA1 | A: a+b two layers | X: SRP9/14-like | H: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology) | T: Signal recognition particle alu RNA binding heterodimer SRP9/14-related | F: SRP9-21 | ECOD (1.6) |
B | SRP14 | e1e8sB1 | A: a+b two layers | X: SRP9/14-like | H: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology) | T: Signal recognition particle alu RNA binding heterodimer SRP9/14-related | F: SRP14 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02290 | Signal recognition particle 14kD protein (SRP14) | Signal recognition particle 14kD protein | The signal recognition particle (SRP) is a multimeric protein involved in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP14 and SRP9 form a complex essential for SRP RNA binding. | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR008832 | Signal recognition particle SRP9 | Family | |
IPR009018 | Signal recognition particle, SRP9/SRP14 subunit | Homologous Superfamily | |
IPR039432 | SRP9 domain | Domain | |
IPR039914 | Signal recognition particle SRP9-like | Family | |
IPR003210 | Signal recognition particle, SRP14 subunit | Family | |
IPR009018 | Signal recognition particle, SRP9/SRP14 subunit | Homologous Superfamily |