1FLO
FLP Recombinase-Holliday Junction Complex I
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
I [auth A] | SCOP2B Superfamily | lambda integrase clamp domain-like | 8034602 | 3000550 | SCOP2B (2022-06-29) |
I [auth A] | SCOP2B Superfamily | DNA breaking-rejoining enzymes | 8034603 | 3001127 | SCOP2B (2022-06-29) |
J [auth B] | SCOP2B Superfamily | DNA breaking-rejoining enzymes | 8034603 | 3001127 | SCOP2B (2022-06-29) |
J [auth B] | SCOP2B Superfamily | lambda integrase clamp domain-like | 8034602 | 3000550 | SCOP2B (2022-06-29) |
K [auth C] | SCOP2B Superfamily | DNA breaking-rejoining enzymes | 8034603 | 3001127 | SCOP2B (2022-06-29) |
K [auth C] | SCOP2B Superfamily | lambda integrase clamp domain-like | 8034602 | 3000550 | SCOP2B (2022-06-29) |
L [auth D] | SCOP2B Superfamily | lambda integrase clamp domain-like | 8034602 | 3000550 | SCOP2B (2022-06-29) |
L [auth D] | SCOP2B Superfamily | DNA breaking-rejoining enzymes | 8034603 | 3001127 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
I [auth A] | Flp_C_C | e1floA2 | A: alpha arrays | X: HTH | H: HTH | T: DNA breaking-rejoining enzymes | F: Flp_C_C | ECOD (1.6) |
I [auth A] | Flp_C_N | e1floA1 | A: alpha arrays | X: HTH | H: HTH | T: DNA breaking-rejoining enzymes | F: Flp_C_N | ECOD (1.6) |
I [auth A] | Flp_N | e1floA3 | A: alpha arrays | X: lambda integrase-N-like | H: lambda integrase-N (From Topology) | T: lambda integrase-N | F: Flp_N | ECOD (1.6) |
J [auth B] | Flp_C_C | e1floB2 | A: alpha arrays | X: HTH | H: HTH | T: DNA breaking-rejoining enzymes | F: Flp_C_C | ECOD (1.6) |
J [auth B] | Flp_C_N | e1floB1 | A: alpha arrays | X: HTH | H: HTH | T: DNA breaking-rejoining enzymes | F: Flp_C_N | ECOD (1.6) |
J [auth B] | Flp_N | e1floB3 | A: alpha arrays | X: lambda integrase-N-like | H: lambda integrase-N (From Topology) | T: lambda integrase-N | F: Flp_N | ECOD (1.6) |
K [auth C] | Flp_C_C | e1floC2 | A: alpha arrays | X: HTH | H: HTH | T: DNA breaking-rejoining enzymes | F: Flp_C_C | ECOD (1.6) |
K [auth C] | Flp_C_N | e1floC1 | A: alpha arrays | X: HTH | H: HTH | T: DNA breaking-rejoining enzymes | F: Flp_C_N | ECOD (1.6) |
K [auth C] | Flp_N | e1floC3 | A: alpha arrays | X: lambda integrase-N-like | H: lambda integrase-N (From Topology) | T: lambda integrase-N | F: Flp_N | ECOD (1.6) |
L [auth D] | Flp_C_C | e1floD2 | A: alpha arrays | X: HTH | H: HTH | T: DNA breaking-rejoining enzymes | F: Flp_C_C | ECOD (1.6) |
L [auth D] | Flp_C_N | e1floD1 | A: alpha arrays | X: HTH | H: HTH | T: DNA breaking-rejoining enzymes | F: Flp_C_N | ECOD (1.6) |
L [auth D] | Flp_N | e1floD3 | A: alpha arrays | X: lambda integrase-N-like | H: lambda integrase-N (From Topology) | T: lambda integrase-N | F: Flp_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
I [auth A] | 3.30.300.80 | Alpha Beta | 2-Layer Sandwich | GMP Synthetase | Chain A, domain 3 | CATH (4.3.0) |
I [auth A] | 1.10.443.10 | Mainly Alpha | Orthogonal Bundle | hpI Integrase | Chain A | CATH (4.3.0) |
J [auth B] | 3.30.300.80 | Alpha Beta | 2-Layer Sandwich | GMP Synthetase | Chain A, domain 3 | CATH (4.3.0) |
J [auth B] | 1.10.443.10 | Mainly Alpha | Orthogonal Bundle | hpI Integrase | Chain A | CATH (4.3.0) |
K [auth C] | 3.30.300.80 | Alpha Beta | 2-Layer Sandwich | GMP Synthetase | Chain A, domain 3 | CATH (4.3.0) |
K [auth C] | 1.10.443.10 | Mainly Alpha | Orthogonal Bundle | hpI Integrase | Chain A | CATH (4.3.0) |
L [auth D] | 3.30.300.80 | Alpha Beta | 2-Layer Sandwich | GMP Synthetase | Chain A, domain 3 | CATH (4.3.0) |
L [auth D] | 1.10.443.10 | Mainly Alpha | Orthogonal Bundle | hpI Integrase | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
I [auth A], J [auth B], K [auth C], L [auth D] | PF05202 | Recombinase Flp protein (Flp_C) | Recombinase Flp protein | - | Family |
I [auth A], J [auth B], K [auth C], L [auth D] | PF03930 | Recombinase Flp protein N-terminus (Flp_N) | Recombinase Flp protein N-terminus | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth E], C [auth G], E [auth I], G [auth K] | SYMMETRIZED FRT DNA SITES | - | - | - |
B [auth F], D [auth H], F [auth J], H [auth L] | SYMMETRIZED FRT DNA SITES | - | - | - |
I [auth A], J [auth B], K [auth C], L [auth D] | FLP RECOMBINASE | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
I [auth A], J [auth B], K [auth C], L [auth D] | IPR022647 | Recombinase Flp protein, N-terminal | Domain |
I [auth A], J [auth B], K [auth C], L [auth D] | IPR011010 | DNA breaking-rejoining enzyme, catalytic core | Homologous Superfamily |
I [auth A], J [auth B], K [auth C], L [auth D] | IPR005626 | Recombinase Flp protein, C-terminal | Domain |
I [auth A], J [auth B], K [auth C], L [auth D] | IPR013762 | Integrase-like, catalytic domain superfamily | Homologous Superfamily |