1GL6
Plasmid coupling protein TrwB in complex with the non-hydrolysable GTP analogue GDPNP
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | TrwB/VirB4 insert domain-like | 8056658 | 3002354 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018216 | 3002019 | SCOP2B (2022-06-29) |
D [auth E] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018216 | 3002019 | SCOP2B (2022-06-29) |
D [auth E] | SCOP2B Superfamily | TrwB/VirB4 insert domain-like | 8056658 | 3002354 | SCOP2B (2022-06-29) |
E [auth F] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018216 | 3002019 | SCOP2B (2022-06-29) |
E [auth F] | SCOP2B Superfamily | TrwB/VirB4 insert domain-like | 8056658 | 3002354 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | TrwB/VirB4 insert domain-like | 8056658 | 3002354 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018216 | 3002019 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | TrwB/VirB4 insert domain-like | 8056658 | 3002354 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018216 | 3002019 | SCOP2B (2022-06-29) |
F [auth G] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018216 | 3002019 | SCOP2B (2022-06-29) |
F [auth G] | SCOP2B Superfamily | TrwB/VirB4 insert domain-like | 8056658 | 3002354 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | TrwB_AAD_bind | e1gl6B1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: TrwB_AAD_bind | ECOD (1.6) |
D [auth E] | TrwB_AAD_bind | e1gl6E1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: TrwB_AAD_bind | ECOD (1.6) |
E [auth F] | TrwB_AAD_bind | e1gl6F1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: TrwB_AAD_bind | ECOD (1.6) |
A | TrwB_AAD_bind | e1gl6A1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: TrwB_AAD_bind | ECOD (1.6) |
C [auth D] | TrwB_AAD_bind | e1gl6D1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: TrwB_AAD_bind | ECOD (1.6) |
F [auth G] | TrwB_AAD_bind | e1gl6G1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: TrwB_AAD_bind | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF10412 | Type IV secretion-system coupling protein DNA-binding domain (TrwB_AAD_bind) | Type IV secretion-system coupling protein DNA-binding domain | The plasmid conjugative coupling protein TrwB forms hexamers from six structurally very similar protomers [1]. This hexamer contains a central channel running from the cytosolic pole (made up by the AADs) to the membrane pole ending at the transmembr ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
ATPASE | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR019476 | Type IV secretion system coupling protein TraD, DNA-binding domain | Domain | |
IPR051539 | Type IV secretion system-coupling protein | Family | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |