1H0I
Complex of a chitinase with the natural product cyclopentapeptide argifin from Gliocladium
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | CBM_5_12 | e1h0iB2 | A: beta meanders | X: WW domain-like | H: Carbohydrate binding domain (From Topology) | T: Carbohydrate binding domain | F: CBM_5_12 | ECOD (1.6) |
B | ChiA | e1h0iB1 | A: a+b two layers | X: FKBP-like | H: Chitinase insertion domain (From Topology) | T: Chitinase insertion domain | F: ChiA | ECOD (1.6) |
B | Glyco_hydro_18 | e1h0iB3 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_18 | ECOD (1.6) |
A | CBM_5_12 | e1h0iA2 | A: beta meanders | X: WW domain-like | H: Carbohydrate binding domain (From Topology) | T: Carbohydrate binding domain | F: CBM_5_12 | ECOD (1.6) |
A | ChiA | e1h0iA1 | A: a+b two layers | X: FKBP-like | H: Chitinase insertion domain (From Topology) | T: Chitinase insertion domain | F: ChiA | ECOD (1.6) |
A | Glyco_hydro_18 | e1h0iA3 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_18 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
B | 3.10.50.10 | Alpha Beta | Roll | Chitinase A | domain 3 | CATH (4.3.0) |
B | 2.10.10.20 | Mainly Beta | Ribbon | Seminal Fluid Protein PDC-109 (Domain B) | Carbohydrate-binding module superfamily 5/12 | CATH (4.3.0) |
A | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
A | 3.10.50.10 | Alpha Beta | Roll | Chitinase A | domain 3 | CATH (4.3.0) |
A | 2.10.10.20 | Mainly Beta | Ribbon | Seminal Fluid Protein PDC-109 (Domain B) | Carbohydrate-binding module superfamily 5/12 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00704 | Glycosyl hydrolases family 18 (Glyco_hydro_18) | Glycosyl hydrolases family 18 | Domain | ||
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR029070 | Chitinase insertion domain superfamily | Homologous Superfamily | |
IPR001579 | Glycosyl hydrolase family 18, active site | Active Site | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR003610 | Carbohydrate binding module family 5/12 | Domain | |
IPR050314 | Glycosyl Hydrolase Family 18 | Family | |
IPR001223 | Glycoside hydrolase family 18, catalytic domain | Domain | |
IPR011583 | Chitinase II/V-like, catalytic domain | Domain | |
IPR036573 | Carbohydrate-binding module superfamily 5/12 | Homologous Superfamily |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Monotopic/peripheral | Alpha/Beta monotopic/peripheral | Transglycosidases | Glycosyl hydrolases family 18 |
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
DAL | AA0111 , AA0191 : meso-lanthionine MOD:00120 , D-alanine (Ala) MOD:00198 , D-alanine (Ser) MOD:00858 , D-alanine MOD:00862 | : |
IAS | AA0111 , AA0191 | : |
MEA | Parent Component: PHE : AA0111 , AA0191 , AA0065 : meso-lanthionine MOD:00120 , D-alanine (Ala) MOD:00198 , D-alanine (Ser) MOD:00858 , D-alanine MOD:00862 , N-methyl-L-phenylalanine MOD:00074 | |
VR0 | Parent Component: ARG : AA0111 , AA0191 , AA0065 |