1HDF
Evolution of the eye lens beta-gamma-crystallin domain fold
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1hdfa_ | All beta proteins | gamma-Crystallin-like | gamma-Crystallin-like | Crystallins/Ca-binding development proteins | Spherulin 3a (S3a) | (Physarum polycephalum ) [TaxId: 5791 ], | SCOPe (2.08) |
B | d1hdfb_ | All beta proteins | gamma-Crystallin-like | gamma-Crystallin-like | Crystallins/Ca-binding development proteins | Spherulin 3a (S3a) | (Physarum polycephalum ) [TaxId: 5791 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Crystallins/Ca-binding development proteins | 8028689 | 4002359 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | gamma-Crystallin-like | 8041068 | 3001138 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | gamma-Crystallin-like | 8041068 | 3001138 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Crystall_3 | e1hdfA1 | A: beta sandwiches | X: gamma-Crystallin-like (From Topology) | H: gamma-Crystallin-like (From Topology) | T: gamma-Crystallin-like | F: Crystall_3 | ECOD (1.6) |
B | Crystall_3 | e1hdfB1 | A: beta sandwiches | X: gamma-Crystallin-like (From Topology) | H: gamma-Crystallin-like (From Topology) | T: gamma-Crystallin-like | F: Crystall_3 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.20.10 | Mainly Beta | Sandwich | Gamma-B Crystallin | domain 1 | CATH (4.3.0) |
B | 2.60.20.10 | Mainly Beta | Sandwich | Gamma-B Crystallin | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08964 | Beta/Gamma crystallin (Crystall_3) | Beta/Gamma crystallin | This family of beta/gamma crystallins includes the N-terminal domain of Dictyostelium discoideum Calcium-dependent cell adhesion molecule 1 (Swiss:P54657), which mediates cell-cell adhesion through homophilic interactions [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
SPHERULIN 3A | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001064 | Beta/gamma crystallin | Domain | |
IPR011024 | Gamma-crystallin-like | Homologous Superfamily | |
IPR015059 | Calcium-dependent cell adhesion molecule, N-terminal | Domain |