1KDX

KIX DOMAIN OF MOUSE CBP (CREB BINDING PROTEIN) IN COMPLEX WITH PHOSPHORYLATED KINASE INDUCIBLE DOMAIN (PKID) OF RAT CREB (CYCLIC AMP RESPONSE ELEMENT BINDING PROTEIN), NMR 17 STRUCTURES

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1kdxa_	All alpha proteins	Kix domain of CBP (creb binding protein)	Kix domain of CBP (creb binding protein)	Kix domain of CBP (creb binding protein)	Kix domain of CBP (creb binding protein)	house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Kix domain-like	8041523	3001244	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	KIX	e1kdxA1	A: alpha arrays	X: RuvA-C	H: Elongation factor TFIIS domain 2/ Kix domain of creb binding protein (From Topology)	T: Elongation factor TFIIS domain 2/ Kix domain of creb binding protein	F: KIX	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.246.20	Mainly Alpha	Orthogonal Bundle	Serum Albumin	Chain A, Domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF02172	KIX domain (KIX)	KIX domain	CBP and P300 bind to the CREB via a domain known as KIX [1]. The KIX domain of CBP also binds to transactivation domains of other nuclear factors including Myb and Jun.	Domain
B	PF02173	pKID domain (pKID)	pKID domain	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	CBP	transcription factor binding basal transcription machinery binding protein binding binding basal RNA polymerase II transcription machinery binding general transcription initiation factor binding RNA polymerase II general transcription initiation factor binding TFIIB-class transcription factor binding protein-lysine-acetyltransferase activity catalytic activity, acting on a protein protein N-acetyltransferase activity N-acetyltransferase activity acyltransferase activity histone H3 acetyltransferase activity transcription factor binding basal transcription machinery binding protein binding binding basal RNA polymerase II transcription machinery binding general transcription initiation factor binding RNA polymerase II general transcription initiation factor binding TFIIB-class transcription factor binding protein-lysine-acetyltransferase activity catalytic activity, acting on a protein protein N-acetyltransferase activity N-acetyltransferase activity acyltransferase activity histone H3 acetyltransferase activity transferase activity histone acetyltransferase activity acetyltransferase activity histone H3K56 acetyltransferase activity histone modifying activity acyltransferase activity, transferring groups other than amino-acyl groups catalytic activity N-acyltransferase activity histone H3K122 acetyltransferase activity bHLH transcription factor binding DNA-binding transcription factor binding MRF binding histone H3K9 acetyltransferase activity DNA binding nucleic acid binding molecular adaptor activity histone H3K27 acetyltransferase activity histone H4K12 acetyltransferase activity histone H4 acetyltransferase activity protein domain specific binding cAMP response element binding protein binding RNA polymerase II-specific DNA-binding transcription factor binding histone H4K8 acetyltransferase activity chromatin binding transcription coactivator activity transcription regulator activity transcription coregulator activity protein-macromolecule adaptor activity histone H3K4 acetyltransferase activity histone H3K14 acetyltransferase activity damaged DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding double-stranded DNA binding RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription regulatory region nucleic acid binding histone H3K18 acetyltransferase activity histone H2B acetyltransferase activity histone H2BK12 acetyltransferase activity peptide lactyltransferase (CoA-dependent) activity histone H2AK9 acetyltransferase activity histone H2A acetyltransferase activity histone H2AK5 acetyltransferase activity histone H4K5 acetyltransferase activity histone H2BK5 acetyltransferase activity histone H4K16 acetyltransferase activity cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding histone lactyltransferase (CoA-dependent) activity histone H3K36 acetyltransferase activity disordered domain specific binding histone H3K23 acetyltransferase activity	protein destabilization regulation of protein stability biological regulation regulation of biological quality developmental process multicellular organismal process germ-line stem cell population maintenance maintenance of cell number stem cell population maintenance regulation of biosynthetic process regulation of biological process regulation of cellular process positive regulation of biological process regulation of macromolecule metabolic process protein destabilization regulation of protein stability biological regulation regulation of biological quality developmental process multicellular organismal process germ-line stem cell population maintenance maintenance of cell number stem cell population maintenance regulation of biosynthetic process regulation of biological process regulation of cellular process positive regulation of biological process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process positive regulation of macromolecule biosynthetic process regulation of gene expression positive regulation of metabolic process biosynthetic process positive regulation of gene expression positive regulation of biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process positive regulation of macromolecule metabolic process macromolecule metabolic process regulation of metabolic process positive regulation of cellular process negative regulation of viral process regulation of viral process viral process negative regulation of biological process positive regulation of DNA-binding transcription factor activity RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process positive regulation of molecular function nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process primary metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process regulation of molecular function regulation of DNA-binding transcription factor activity regulation of DNA-templated transcription cellular response to stimulus regulation of DNA recombination response to stimulus regulation of double-strand break repair regulation of cellular response to stress positive regulation of double-strand break repair via homologous recombination positive regulation of response to stimulus positive regulation of DNA repair cellular response to stress response to stress regulation of response to stress recombinational repair double-strand break repair via homologous recombination DNA repair positive regulation of DNA recombination double-strand break repair positive regulation of nucleobase-containing compound metabolic process DNA recombination DNA metabolic process positive regulation of double-strand break repair regulation of DNA repair regulation of double-strand break repair via homologous recombination positive regulation of DNA metabolic process DNA damage response regulation of response to stimulus regulation of DNA metabolic process positive regulation of DNA-templated transcription transcription by RNA polymerase II regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process anatomical structure morphogenesis head development face morphogenesis anatomical structure development head morphogenesis face development body morphogenesis peptidyl-lysine acetylation N-terminal peptidyl-lysine acetylation peptidyl-lysine modification protein acylation protein maturation protein acetylation N-terminal protein amino acid modification macromolecule modification peptidyl-amino acid modification N-terminal protein amino acid acetylation protein metabolic process protein modification process negative regulation of type I interferon production cytokine production negative regulation of cellular process regulation of cytokine production regulation of multicellular organismal process regulation of interferon-beta production interferon-beta production negative regulation of macromolecule metabolic process type I interferon production negative regulation of metabolic process negative regulation of cytokine production negative regulation of gene expression negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process negative regulation of interferon-beta production negative regulation of multicellular organismal process regulation of type I interferon production rhythmic process response to light stimulus cellular response to radiation response to UV cellular response to environmental stimulus cellular response to light stimulus response to radiation response to abiotic stimulus cellular response to abiotic stimulus cellular response to UV cellular response to endogenous stimulus response to hepatocyte growth factor cellular response to growth factor stimulus cellular response to hepatocyte growth factor stimulus response to endogenous stimulus response to growth factor negative regulation of RNA biosynthetic process negative regulation of transcription by RNA polymerase I transcription by RNA polymerase I negative regulation of nucleobase-containing compound metabolic process negative regulation of DNA-templated transcription regulation of transcription by RNA polymerase I negative regulation of RNA metabolic process cellular response to virus biological process involved in interspecies interaction between organisms response to other organism response to external stimulus response to external biotic stimulus response to virus response to biotic stimulus	protein-containing complex transcription regulator complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular membraneless organelle chromosome chromosomal region kinetochore intracellular organelle organelle membraneless organelle chromosome, centromeric region outer kinetochore protein-containing complex transcription regulator complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular membraneless organelle chromosome chromosomal region kinetochore intracellular organelle organelle membraneless organelle chromosome, centromeric region outer kinetochore condensed chromosome, centromeric region supramolecular complex condensed chromosome chromatin catalytic complex transferase complex histone acetyltransferase complex acetyltransferase complex protein acetyltransferase complex intracellular protein-containing complex RNA polymerase II transcription regulator complex membrane-bounded organelle nucleus nuclear protein-containing complex intracellular membrane-bounded organelle membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen nuclear body PML body
B	CREB	sequence-specific DNA binding DNA binding binding nucleic acid binding sequence-specific double-stranded DNA binding double-stranded DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription factor activity DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription activator activity transcription factor binding transcription coregulator binding protein binding sequence-specific DNA binding DNA binding binding nucleic acid binding sequence-specific double-stranded DNA binding double-stranded DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription factor activity DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription activator activity transcription factor binding transcription coregulator binding protein binding transcription coactivator binding histone acetyltransferase binding enzyme binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding transcription cis-regulatory region binding cAMP response element binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding arrestin family protein binding identical protein binding RNA polymerase II-specific DNA-binding transcription factor binding DNA-binding transcription factor binding Hsp70 protein binding protein-folding chaperone binding heat shock protein binding	response to stimulus response to chemical response to xenobiotic stimulus cellular response to stimulus cellular response to nitrogen compound response to endogenous stimulus response to peptide hormone cellular response to peptide hormone stimulus response to oxygen-containing compound response to nitrogen compound cellular response to oxygen-containing compound cellular response to endogenous stimulus cellular response to chemical stimulus response to hormone response to stimulus response to chemical response to xenobiotic stimulus cellular response to stimulus cellular response to nitrogen compound response to endogenous stimulus response to peptide hormone cellular response to peptide hormone stimulus response to oxygen-containing compound response to nitrogen compound cellular response to oxygen-containing compound cellular response to endogenous stimulus cellular response to chemical stimulus response to hormone cellular process cellular response to insulin-like growth factor stimulus cellular response to hormone stimulus regulation of protein stability biological regulation regulation of biological quality protein stabilization cellular component organization regulation of cellular component size cellular component organization or biogenesis regulation of cell size regulation of anatomical structure size response to glucagon regulation of cellular process transcription preinitiation complex assembly positive regulation of macromolecule biosynthetic process regulation of primary metabolic process cellular component biogenesis nucleobase-containing compound metabolic process DNA-templated transcription positive regulation of metabolic process regulation of DNA-templated transcription initiation regulation of RNA metabolic process cellular component assembly transcription by RNA polymerase II positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process transcription initiation at RNA polymerase II promoter regulation of transcription by RNA polymerase II regulation of biological process positive regulation of nucleobase-containing compound metabolic process primary metabolic process positive regulation of transcription by RNA polymerase II positive regulation of DNA-templated transcription initiation positive regulation of RNA metabolic process regulation of gene expression biosynthetic process RNA polymerase II preinitiation complex assembly metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process regulation of RNA polymerase II transcription preinitiation complex assembly positive regulation of cellular component organization regulation of cellular component organization positive regulation of DNA-templated transcription positive regulation of biological process RNA metabolic process protein-DNA complex organization RNA biosynthetic process nucleic acid biosynthetic process positive regulation of protein-containing complex assembly regulation of protein-containing complex assembly positive regulation of biosynthetic process protein-containing complex assembly positive regulation of cellular process regulation of RNA biosynthetic process regulation of biosynthetic process positive regulation of RNA polymerase II transcription preinitiation complex assembly protein-containing complex organization positive regulation of cellular component biogenesis positive regulation of transcription initiation by RNA polymerase II protein-DNA complex assembly regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression regulation of cellular component biogenesis macromolecule biosynthetic process DNA-templated transcription initiation nucleic acid metabolic process positive regulation of RNA biosynthetic process regulation of transcription initiation by RNA polymerase II behavior multicellular organismal process system process learning or memory nervous system process cognition memory response to lipid response to retinoic acid cellular response to retinoic acid cellular response to lipid developmental process mammary gland development gland development animal organ development anatomical structure development axonogenesis cellular developmental process cell projection organization plasma membrane bounded cell projection morphogenesis cell development neuron projection development cell morphogenesis neurogenesis multicellular organism development cell projection morphogenesis neuron differentiation neuron projection morphogenesis cell differentiation system development plasma membrane bounded cell projection organization nervous system development axon development cell morphogenesis involved in neuron differentiation generation of neurons anatomical structure morphogenesis neuron development response to peptide response to cytokine response to erythropoietin mRNA transcription by RNA polymerase II mRNA transcription mRNA metabolic process response to morphine response to isoquinoline alkaloid response to alkaloid regulation of body fluid levels secretion transport establishment of localization body fluid secretion localization lactation signaling regulation of hormone levels cell-cell signaling export from cell hormone secretion cell communication secretion by cell signal release hormone transport intracellular signal transduction cAMP-mediated signaling intracellular signaling cassette signal transduction response to hypobaric hypoxia response to decreased oxygen levels response to hypoxia response to stress response to oxygen levels response to abiotic stimulus cellular response to growth factor stimulus cell surface receptor protein serine/threonine kinase signaling pathway cell surface receptor signaling pathway cellular response to transforming growth factor beta stimulus response to transforming growth factor beta transforming growth factor beta receptor signaling pathway response to growth factor transforming growth factor beta receptor superfamily signaling pathway enzyme-linked receptor protein signaling pathway response to ketone response to alcohol response to dehydroepiandrosterone rhythmic process circadian rhythm epithelium development tube development respiratory tube development lung epithelium development type I pneumocyte differentiation tissue development epithelial cell differentiation lung epithelial cell differentiation lung cell differentiation lung development respiratory system development positive regulation of cell communication modulation of chemical synaptic transmission long-term synaptic potentiation synaptic signaling positive regulation of long-term synaptic potentiation regulation of synaptic plasticity trans-synaptic signaling regulation of signaling positive regulation of synaptic transmission chemical synaptic transmission regulation of trans-synaptic signaling anterograde trans-synaptic signaling regulation of long-term synaptic potentiation regulation of cell communication positive regulation of signaling negative regulation of programmed cell death regulation of apoptotic process negative regulation of biological process regulation of programmed cell death cell death negative regulation of apoptotic process negative regulation of cellular process apoptotic process programmed cell death response to activity fibroblast proliferation cell population proliferation regulation of cell population proliferation regulation of fibroblast proliferation cellular response to metal ion response to metal ion response to zinc ion cellular response to zinc ion myeloid leukocyte differentiation hemopoiesis myeloid cell differentiation osteoclast differentiation leukocyte differentiation negative regulation of metabolic process negative regulation of gene expression negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process negative regulation of macromolecule metabolic process response to purine-containing compound cellular response to forskolin cellular response to alcohol response to forskolin cellular response to ketone regulation of localization regulation of hormone secretion positive regulation of secretion by cell positive regulation of hormone secretion regulation of secretion by cell positive regulation of secretion regulation of transport regulation of secretion positive regulation of transport positive regulation of programmed cell death positive regulation of apoptotic process regulation of membrane depolarization membrane depolarization positive regulation of membrane depolarization regulation of membrane potential cellular response to nerve growth factor stimulus response to nerve growth factor head development forebrain development endocrine system development pituitary gland development brain development diencephalon development central nervous system development response to acid chemical response to L-glutamate response to amino acid fat cell differentiation positive regulation of fat cell differentiation regulation of developmental process regulation of cell differentiation positive regulation of developmental process positive regulation of cell differentiation regulation of fat cell differentiation chemotaxis taxis chemotaxis to arachidonate response to external stimulus locomotion regulation of steroid biosynthetic process ketone metabolic process steroid metabolic process regulation of lipid metabolic process lipid biosynthetic process regulation of small molecule metabolic process regulation of testosterone biosynthetic process small molecule metabolic process steroid biosynthetic process small molecule biosynthetic process olefinic compound biosynthetic process regulation of ketone biosynthetic process regulation of steroid metabolic process regulation of ketone metabolic process testosterone biosynthetic process olefinic compound metabolic process regulation of lipid biosynthetic process ketone biosynthetic process lipid metabolic process vesicle organization organelle organization secretory granule organization endomembrane system organization cellular response to platelet-derived growth factor stimulus response to platelet-derived growth factor regulation of muscle tissue development striated muscle tissue development muscle structure development positive regulation of muscle organ development regulation of cardiac muscle tissue development regulation of multicellular organismal process muscle tissue development muscle organ development positive regulation of cardiac muscle tissue development heart development cardiac muscle tissue development positive regulation of striated muscle tissue development regulation of striated muscle tissue development circulatory system development positive regulation of muscle tissue development regulation of muscle organ development positive regulation of multicellular organismal process positive regulation of transforming growth factor beta3 production regulation of transforming growth factor beta production regulation of transforming growth factor beta3 production cytokine production regulation of cytokine production transforming growth factor beta production transforming growth factor beta3 production positive regulation of gene expression positive regulation of transforming growth factor beta production positive regulation of cytokine production positive regulation of lipid biosynthetic process positive regulation of lipid metabolic process response to light stimulus learning visual learning visual behavior associative learning response to radiation response to ethanol lung saccule development lung alveolus development negative regulation of RNA biosynthetic process negative regulation of nucleobase-containing compound metabolic process negative regulation of DNA-templated transcription negative regulation of transcription by competitive promoter binding negative regulation of RNA metabolic process regulation of multicellular organism growth regulation of growth regulation of developmental growth developmental growth growth positive regulation of multicellular organism growth multicellular organism growth positive regulation of growth positive regulation of developmental growth response to fatty acid cellular response to fatty acid response to hepatocyte growth factor cellular response to hepatocyte growth factor stimulus response to nicotine regulation of glial cell proliferation gliogenesis glial cell proliferation response to cocaine response to leukemia inhibitory factor cellular response to cytokine stimulus cellular response to leukemia inhibitory factor regulation of leukocyte differentiation positive regulation of osteoclast differentiation regulation of cell development regulation of osteoclast differentiation positive regulation of hemopoiesis regulation of immune system process positive regulation of immune system process regulation of multicellular organismal development regulation of myeloid cell differentiation positive regulation of cell development regulation of myeloid leukocyte differentiation positive regulation of myeloid leukocyte differentiation immune system process positive regulation of myeloid cell differentiation regulation of hemopoiesis positive regulation of leukocyte differentiation	intracellular organelle cellular anatomical structure intracellular anatomical structure organelle euchromatin membraneless organelle intracellular membraneless organelle chromatin chromosome membrane-bounded organelle mitochondrion membrane-enclosed lumen intracellular membrane-bounded organelle mitochondrial matrix intracellular organelle cellular anatomical structure intracellular anatomical structure organelle euchromatin membraneless organelle intracellular membraneless organelle chromatin chromosome membrane-bounded organelle mitochondrion membrane-enclosed lumen intracellular membrane-bounded organelle mitochondrial matrix intracellular organelle lumen organelle lumen cytoplasm protein-containing complex transcription regulator complex axon cell projection neuron projection plasma membrane bounded cell projection RNA polymerase II transcription regulator complex nucleus nuclear protein-containing complex ATF4-CREB1 transcription factor complex nucleoplasm nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR043145	Zinc finger, ZZ-type superfamily	Homologous Superfamily
A	IPR018359	Bromodomain, conserved site	Conserved Site
A	IPR036529	Coactivator CBP, KIX domain superfamily	Homologous Superfamily
A	IPR009110	Nuclear receptor coactivator, interlocking	Homologous Superfamily
A	IPR000197	Zinc finger, TAZ-type	Domain
A	IPR000433	Zinc finger, ZZ-type	Domain
A	IPR003101	Coactivator CBP, KIX domain	Domain
A	IPR013178	Histone acetyltransferase Rtt109/CBP	Family
A	IPR013083	Zinc finger, RING/FYVE/PHD-type	Homologous Superfamily
A	IPR036427	Bromodomain-like superfamily	Homologous Superfamily
A	IPR010303	CREB-binding protein/p300, atypical RING domain	Domain
A	IPR001487	Bromodomain	Domain
A	IPR035898	TAZ domain superfamily	Homologous Superfamily
A	IPR037073	Nuclear receptor coactivator, CREB-bp-like, interlocking domain superfamily	Homologous Superfamily
A	IPR014744	Nuclear receptor coactivator, CREB-bp-like, interlocking	Domain
A	IPR038547	CBP/p300, atypical RING domain superfamily	Homologous Superfamily
A	IPR031162	CBP/p300-type histone acetyltransferase domain	Domain
B	IPR046347	Basic-leucine zipper domain superfamily	Homologous Superfamily
B	IPR003102	Cyclic AMP-responsive element-binding protein 1-like, pKID	Domain
B	IPR004827	Basic-leucine zipper domain	Domain
B	IPR001630	cAMP response element binding (CREB) protein	Family