1KKQ
Crystal structure of the human PPAR-alpha ligand-binding domain in complex with an antagonist GW6471 and a SMRT corepressor motif
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Nuclear receptor ligand-binding domain | 8043779 | 3001442 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Nuclear receptor ligand-binding domain | 8043779 | 3001442 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Nuclear receptor ligand-binding domain | 8043779 | 3001442 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Nuclear receptor ligand-binding domain | 8043779 | 3001442 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Hormone_recep_1 | e1kkqA1 | A: alpha arrays | X: Nuclear receptor ligand-binding domain (From Topology) | H: Nuclear receptor ligand-binding domain (From Topology) | T: Nuclear receptor ligand-binding domain | F: Hormone_recep_1 | ECOD (1.6) |
B | Hormone_recep_1 | e1kkqB1 | A: alpha arrays | X: Nuclear receptor ligand-binding domain (From Topology) | H: Nuclear receptor ligand-binding domain (From Topology) | T: Nuclear receptor ligand-binding domain | F: Hormone_recep_1 | ECOD (1.6) |
C | Hormone_recep_1 | e1kkqC1 | A: alpha arrays | X: Nuclear receptor ligand-binding domain (From Topology) | H: Nuclear receptor ligand-binding domain (From Topology) | T: Nuclear receptor ligand-binding domain | F: Hormone_recep_1 | ECOD (1.6) |
D | Hormone_recep_1 | e1kkqD1 | A: alpha arrays | X: Nuclear receptor ligand-binding domain (From Topology) | H: Nuclear receptor ligand-binding domain (From Topology) | T: Nuclear receptor ligand-binding domain | F: Hormone_recep_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.565.10 | Mainly Alpha | Orthogonal Bundle | Retinoid X Receptor | Retinoid X Receptor | CATH (4.3.0) |
B | 1.10.565.10 | Mainly Alpha | Orthogonal Bundle | Retinoid X Receptor | Retinoid X Receptor | CATH (4.3.0) |
C | 1.10.565.10 | Mainly Alpha | Orthogonal Bundle | Retinoid X Receptor | Retinoid X Receptor | CATH (4.3.0) |
D | 1.10.565.10 | Mainly Alpha | Orthogonal Bundle | Retinoid X Receptor | Retinoid X Receptor | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001628 | Zinc finger, nuclear hormone receptor-type | Domain | |
IPR003076 | Peroxisome proliferator-activated receptor alpha | Family | |
IPR013088 | Zinc finger, NHR/GATA-type | Homologous Superfamily | |
IPR003074 | Peroxisome proliferator-activated receptor | Family | |
IPR050234 | Nuclear hormone receptor family NR1 subfamily | Family | |
IPR001723 | Nuclear hormone receptor | Family | |
IPR000536 | Nuclear hormone receptor, ligand-binding domain | Domain | |
IPR035500 | Nuclear hormone receptor-like domain superfamily | Homologous Superfamily | |
IPR017930 | Myb domain | Domain | |
IPR051571 | Nuclear receptor corepressor | Family | |
IPR009057 | Homedomain-like superfamily | Homologous Superfamily | |
IPR031557 | N-CoR, GPS2-interacting domain | Domain | |
IPR017884 | SANT domain | Domain | |
IPR001005 | SANT/Myb domain | Domain |