1L7A
structural Genomics, crystal structure of Cephalosporin C deacetylase
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1l7aa_ | Alpha and beta proteins (a/b) | alpha/beta-Hydrolases | alpha/beta-Hydrolases | Acetyl xylan esterase-like | Cephalosporin C deacetylase | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
B | d1l7ab_ | Alpha and beta proteins (a/b) | alpha/beta-Hydrolases | alpha/beta-Hydrolases | Acetyl xylan esterase-like | Cephalosporin C deacetylase | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Acetyl xylan esterase-like | 8030544 | 4003110 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | alpha/beta-Hydrolases | 8042923 | 3000102 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | alpha/beta-Hydrolases | 8042923 | 3000102 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | AXE1 | e1l7aA1 | A: a/b three-layered sandwiches | X: alpha/beta-Hydrolases (From Topology) | H: alpha/beta-Hydrolases (From Topology) | T: alpha/beta-Hydrolases | F: AXE1 | ECOD (1.6) |
B | AXE1 | e1l7aB1 | A: a/b three-layered sandwiches | X: alpha/beta-Hydrolases (From Topology) | H: alpha/beta-Hydrolases (From Topology) | T: alpha/beta-Hydrolases | F: AXE1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.1820 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Alpha/Beta hydrolase fold, catalytic domain | CATH (4.3.0) |
B | 3.40.50.1820 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Alpha/Beta hydrolase fold, catalytic domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05448 | Acetyl xylan esterase (AXE1) (AXE1) | Acetyl xylan esterase (AXE1) | This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwoo ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Cephalosporin C deacetylase |
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InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR029058 | Alpha/Beta hydrolase fold | Homologous Superfamily | |
IPR008391 | Acetyl xylan esterase domain | Domain | |
IPR039069 | Carbohydrate esterase 7 family | Family |
Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage
Chains | Enzyme Name | Description | Catalytic Residues |
---|---|---|---|
cephalosporin-C deacetylase M-CSA #866 | Cephalosporin-C deacetylase is an esterase that removes acetyl groups from a number of O-acetylated small substrates, such as acetylated xylose, short xylooligosaccharides and cephalosporin C. It is known not to cleave amide bonds. It is used in the pharmaceutical industry for the chemoenzymatic deacetylation of cephalosporins and the synthesis of novel antibiotics. It is an alpha-beta hydrolase, a member of the carbohydrate esterase 7 family. | Defined by 5 residues: TYR:A-91SER:A-181GLN:A-182ASP:A-269HIS:A-298 | EC: 3.1.1.41 (PDB Primary Data) EC: 3.1.1.72 (UniProt) |