Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyClass II aaRS and biotin synthetases 8035899 3000058 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyNucleic acid-binding proteins 8041919 3000135 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyNucleic acid-binding proteins 8041919 3000135 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyClass II aaRS and biotin synthetases 8035899 3000058 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyNucleic acid-binding proteins 8041919 3000135 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyClass II aaRS and biotin synthetases 8035899 3000058 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AtRNA_anti-codone1lylA1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: tRNA_anti-codonECOD (1.6)
AtRNA-synt_2e1lylA2 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)
BtRNA_anti-codone1lylB1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: tRNA_anti-codonECOD (1.6)
BtRNA-synt_2e1lylB2 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)
CtRNA_anti-codone1lylC1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: tRNA_anti-codonECOD (1.6)
CtRNA-synt_2e1lylC2 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF00152tRNA synthetases class II (D, K and N) (tRNA-synt_2)tRNA synthetases class II (D, K and N)- Domain
A, B, C
PF01336OB-fold nucleic acid binding domain (tRNA_anti-codon)OB-fold nucleic acid binding domainThis family contains OB-fold domains that bind to nucleic acids [4]. The family includes the anti-codon binding domain of lysyl, aspartyl, and asparaginyl -tRNA synthetases (See Pfam:PF00152). Aminoacyl-tRNA synthetases catalyse the addition of an a ...This family contains OB-fold domains that bind to nucleic acids [4]. The family includes the anti-codon binding domain of lysyl, aspartyl, and asparaginyl -tRNA synthetases (See Pfam:PF00152). Aminoacyl-tRNA synthetases catalyse the addition of an amino acid to the appropriate tRNA molecule EC:6.1.1.-. This family also includes part of RecG helicase involved in DNA repair. Replication factor A is a hetero-trimeric complex, that contains a subunit in this family [2,3]. This domain is also found at the C-terminus of bacterial DNA polymerase III alpha chain.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
LYSYL-TRNA SYNTHETASE (LYSU)