Annotations: 1MKF

VIRAL CHEMOKINE BINDING PROTEIN M3 FROM MURINE GAMMAHERPESVIRUS 68

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1mkfa_	All beta proteins	Viral chemokine binding protein m3	Viral chemokine binding protein m3	Viral chemokine binding protein m3	Viral chemokine binding protein m3	Murine herpesvirus 68 (Murid gammaherpesvirus 4 ) [TaxId: 33708 ],	SCOPe (2.08)
B	d1mkfb_	All beta proteins	Viral chemokine binding protein m3	Viral chemokine binding protein m3	Viral chemokine binding protein m3	Viral chemokine binding protein m3	Murine herpesvirus 68 (Murid gammaherpesvirus 4 ) [TaxId: 33708 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Viral chemokine binding protein m3	8031269	4002571	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Viral chemokine binding protein m3	8043647	3001430	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Viral chemokine binding protein m3	8043647	3001430	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	M3	e1mkfA1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: S-adenosyl-L-methionine-dependent methyltransferases	F: M3	ECOD (v294.1)
B	ADAM_CR	e1mkfB1	A: a/b three-layered sandwiches	X: PBZ domain	H: PBZ domain	T: PBZ domain	F: ADAM_CR	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.40.1330	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (4.3.0)
A	2.60.40.1340	Mainly Beta	Sandwich	Immunoglobulin-like	Chemokine-binding protein M3-like	CATH (4.3.0)
B	2.60.40.1330	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (4.3.0)
B	2.60.40.1340	Mainly Beta	Sandwich	Immunoglobulin-like	Chemokine-binding protein M3-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF09213	M3 (M3)	M3	Members of this family of viral chemokine binding proteins adopt a structure consisting of two different beta-sandwich domains of partial topological similarity to immunoglobulin-like folds. They bind with the CC-chemokine MCP-1, acting as cytokine d ...	Members of this family of viral chemokine binding proteins adopt a structure consisting of two different beta-sandwich domains of partial topological similarity to immunoglobulin-like folds. They bind with the CC-chemokine MCP-1, acting as cytokine decoy receptors [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	M3	protein binding binding chemokine binding cytokine binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR015950	Chemokine-binding M3, subdomain 1, viral	Homologous Superfamily
A, B	IPR015951	Chemokine-binding M3, subdomain 2, viral	Homologous Superfamily
A, B	IPR015296	Chemokine-binding M3, viral	Family
A, B	IPR036323	Chemokine-binding M3 superfamily	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.