1MLI | pdb_00001mli

CRYSTAL STRUCTURE OF MUCONOLACTONE ISOMERASE AT 3.3 ANGSTROMS RESOLUTION

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1mlia_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	Muconalactone isomerase, MLI	Muconalactone isomerase, MLI	(Pseudomonas putida ) [TaxId: 303 ],	SCOPe (2.08)
B	d1mlib_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	Muconalactone isomerase, MLI	Muconalactone isomerase, MLI	(Pseudomonas putida ) [TaxId: 303 ],	SCOPe (2.08)
C	d1mlic_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	Muconalactone isomerase, MLI	Muconalactone isomerase, MLI	(Pseudomonas putida ) [TaxId: 303 ],	SCOPe (2.08)
D	d1mlid_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	Muconalactone isomerase, MLI	Muconalactone isomerase, MLI	(Pseudomonas putida ) [TaxId: 303 ],	SCOPe (2.08)
E	d1mlie_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	Muconalactone isomerase, MLI	Muconalactone isomerase, MLI	(Pseudomonas putida ) [TaxId: 303 ],	SCOPe (2.08)
F	d1mlif_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	Muconalactone isomerase, MLI	Muconalactone isomerase, MLI	(Pseudomonas putida ) [TaxId: 303 ],	SCOPe (2.08)
G	d1mlig_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	Muconalactone isomerase, MLI	Muconalactone isomerase, MLI	(Pseudomonas putida ) [TaxId: 303 ],	SCOPe (2.08)
H	d1mlih_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	Muconalactone isomerase, MLI	Muconalactone isomerase, MLI	(Pseudomonas putida ) [TaxId: 303 ],	SCOPe (2.08)
I	d1mlii_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	Muconalactone isomerase, MLI	Muconalactone isomerase, MLI	(Pseudomonas putida ) [TaxId: 303 ],	SCOPe (2.08)
J	d1mlij_	Alpha and beta proteins (a+b)	Ferredoxin-like	Dimeric alpha+beta barrel	Muconalactone isomerase, MLI	Muconalactone isomerase, MLI	(Pseudomonas putida ) [TaxId: 303 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Muconalactone isomerase, MLI	8022869	4001252	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Dimeric alpha+beta barrel	8035249	3000089	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Dimeric alpha+beta barrel	8035249	3000089	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Dimeric alpha+beta barrel	8035249	3000089	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Dimeric alpha+beta barrel	8035249	3000089	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Dimeric alpha+beta barrel	8035249	3000089	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Dimeric alpha+beta barrel	8035249	3000089	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Dimeric alpha+beta barrel	8035249	3000089	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Dimeric alpha+beta barrel	8035249	3000089	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Dimeric alpha+beta barrel	8035249	3000089	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Dimeric alpha+beta barrel	8035249	3000089	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	MIase	e1mliA1	A: a+b two layers	X: Alpha-beta plaits	H: Dimeric alpha+beta barrel	T: Dimeric alpha+beta barrel	F: MIase	ECOD (develop294)
B	ABM	e1mliB1	A: alpha bundles	X: EGF-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: ABM	ECOD (develop294)
C	ABM	e1mliC1	A: alpha bundles	X: EGF-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: ABM	ECOD (develop294)
D	ABM	e1mliD1	A: alpha bundles	X: EGF-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: ABM	ECOD (develop294)
E	ABM	e1mliE1	A: alpha bundles	X: EGF-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: ABM	ECOD (develop294)
F	ABM	e1mliF1	A: alpha bundles	X: EGF-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: ABM	ECOD (develop294)
G	ABM	e1mliG1	A: alpha bundles	X: EGF-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: ABM	ECOD (develop294)
H	ABM	e1mliH1	A: alpha bundles	X: EGF-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: ABM	ECOD (develop294)
I	ABM	e1mliI1	A: alpha bundles	X: EGF-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: ABM	ECOD (develop294)
J	ABM	e1mliJ1	A: alpha bundles	X: EGF-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: ABM	ECOD (develop294)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	MUCONOLACTONE ISOMERASE	isomerase activity intramolecular oxidoreductase activity, transposing C=C bonds intramolecular oxidoreductase activity muconolactone delta-isomerase activity catalytic activity	catabolic process beta-ketoadipate pathway metabolic process cellular process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR003464	Muconolactone delta-isomerase	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR026029	Muconolactone isomerase domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR011008	Dimeric alpha-beta barrel	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.