1N6D | pdb_00001n6d

Tricorn protease in complex with tetrapeptide chloromethyl ketone derivative

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
K [auth F]d1n6df1 All beta proteins PDZ domain-like PDZ domain-like Tail specific protease PDZ domain Tricorn protease (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
K [auth F]d1n6df2 All beta proteins 6-bladed beta-propeller Tricorn protease N-terminal domain Tricorn protease N-terminal domain Tricorn protease N-terminal domain (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
K [auth F]d1n6df3 All beta proteins 7-bladed beta-propeller Tricorn protease domain 2 Tricorn protease domain 2 Tricorn protease domain 2 (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
K [auth F]d1n6df4 Alpha and beta proteins (a/b) ClpP/crotonase ClpP/crotonase Tail specific protease, catalytic domain Tricorn protease (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
I [auth E]d1n6de1 All beta proteins PDZ domain-like PDZ domain-like Tail specific protease PDZ domain Tricorn protease (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
I [auth E]d1n6de2 All beta proteins 6-bladed beta-propeller Tricorn protease N-terminal domain Tricorn protease N-terminal domain Tricorn protease N-terminal domain (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
I [auth E]d1n6de3 All beta proteins 7-bladed beta-propeller Tricorn protease domain 2 Tricorn protease domain 2 Tricorn protease domain 2 (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
I [auth E]d1n6de4 Alpha and beta proteins (a/b) ClpP/crotonase ClpP/crotonase Tail specific protease, catalytic domain Tricorn protease (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
G [auth D]d1n6dd1 All beta proteins PDZ domain-like PDZ domain-like Tail specific protease PDZ domain Tricorn protease (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
G [auth D]d1n6dd2 All beta proteins 6-bladed beta-propeller Tricorn protease N-terminal domain Tricorn protease N-terminal domain Tricorn protease N-terminal domain (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
G [auth D]d1n6dd3 All beta proteins 7-bladed beta-propeller Tricorn protease domain 2 Tricorn protease domain 2 Tricorn protease domain 2 (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
G [auth D]d1n6dd4 Alpha and beta proteins (a/b) ClpP/crotonase ClpP/crotonase Tail specific protease, catalytic domain Tricorn protease (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
E [auth C]d1n6dc1 All beta proteins PDZ domain-like PDZ domain-like Tail specific protease PDZ domain Tricorn protease (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
E [auth C]d1n6dc2 All beta proteins 6-bladed beta-propeller Tricorn protease N-terminal domain Tricorn protease N-terminal domain Tricorn protease N-terminal domain (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
E [auth C]d1n6dc3 All beta proteins 7-bladed beta-propeller Tricorn protease domain 2 Tricorn protease domain 2 Tricorn protease domain 2 (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
E [auth C]d1n6dc4 Alpha and beta proteins (a/b) ClpP/crotonase ClpP/crotonase Tail specific protease, catalytic domain Tricorn protease (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
C [auth B]d1n6db1 All beta proteins PDZ domain-like PDZ domain-like Tail specific protease PDZ domain Tricorn protease (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
C [auth B]d1n6db2 All beta proteins 6-bladed beta-propeller Tricorn protease N-terminal domain Tricorn protease N-terminal domain Tricorn protease N-terminal domain (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
C [auth B]d1n6db3 All beta proteins 7-bladed beta-propeller Tricorn protease domain 2 Tricorn protease domain 2 Tricorn protease domain 2 (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
C [auth B]d1n6db4 Alpha and beta proteins (a/b) ClpP/crotonase ClpP/crotonase Tail specific protease, catalytic domain Tricorn protease (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Ad1n6da1 All beta proteins PDZ domain-like PDZ domain-like Tail specific protease PDZ domain Tricorn protease (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Ad1n6da2 All beta proteins 6-bladed beta-propeller Tricorn protease N-terminal domain Tricorn protease N-terminal domain Tricorn protease N-terminal domain (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Ad1n6da3 All beta proteins 7-bladed beta-propeller Tricorn protease domain 2 Tricorn protease domain 2 Tricorn protease domain 2 (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Ad1n6da4 Alpha and beta proteins (a/b) ClpP/crotonase ClpP/crotonase Tail specific protease, catalytic domain Tricorn protease (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
K [auth F]SCOP2B SuperfamilyTricorn protease domain 2 8037768 3000315 SCOP2B (2022-06-29)
K [auth F]SCOP2B SuperfamilyClpP/crotonase 8037769 3000033 SCOP2B (2022-06-29)
K [auth F]SCOP2B SuperfamilyClpP/crotonase 8037769 3000033 SCOP2B (2022-06-29)
K [auth F]SCOP2B SuperfamilyTricorn protease N-terminal domain 8037767 3000291 SCOP2B (2022-06-29)
K [auth F]SCOP2B SuperfamilyPDZ domain-like 8037766 3000388 SCOP2B (2022-06-29)
I [auth E]SCOP2B SuperfamilyClpP/crotonase 8037769 3000033 SCOP2B (2022-06-29)
I [auth E]SCOP2B SuperfamilyPDZ domain-like 8037766 3000388 SCOP2B (2022-06-29)
I [auth E]SCOP2B SuperfamilyTricorn protease N-terminal domain 8037767 3000291 SCOP2B (2022-06-29)
I [auth E]SCOP2B SuperfamilyTricorn protease domain 2 8037768 3000315 SCOP2B (2022-06-29)
I [auth E]SCOP2B SuperfamilyClpP/crotonase 8037769 3000033 SCOP2B (2022-06-29)
G [auth D]SCOP2B SuperfamilyClpP/crotonase 8037769 3000033 SCOP2B (2022-06-29)
G [auth D]SCOP2B SuperfamilyTricorn protease domain 2 8037768 3000315 SCOP2B (2022-06-29)
G [auth D]SCOP2B SuperfamilyClpP/crotonase 8037769 3000033 SCOP2B (2022-06-29)
G [auth D]SCOP2B SuperfamilyPDZ domain-like 8037766 3000388 SCOP2B (2022-06-29)
G [auth D]SCOP2B SuperfamilyTricorn protease N-terminal domain 8037767 3000291 SCOP2B (2022-06-29)
E [auth C]SCOP2B SuperfamilyPDZ domain-like 8037766 3000388 SCOP2B (2022-06-29)
E [auth C]SCOP2B SuperfamilyClpP/crotonase 8037769 3000033 SCOP2B (2022-06-29)
E [auth C]SCOP2B SuperfamilyTricorn protease N-terminal domain 8037767 3000291 SCOP2B (2022-06-29)
E [auth C]SCOP2B SuperfamilyClpP/crotonase 8037769 3000033 SCOP2B (2022-06-29)
E [auth C]SCOP2B SuperfamilyTricorn protease domain 2 8037768 3000315 SCOP2B (2022-06-29)
C [auth B]SCOP2B SuperfamilyTricorn protease N-terminal domain 8037767 3000291 SCOP2B (2022-06-29)
C [auth B]SCOP2B SuperfamilyClpP/crotonase 8037769 3000033 SCOP2B (2022-06-29)
C [auth B]SCOP2B SuperfamilyClpP/crotonase 8037769 3000033 SCOP2B (2022-06-29)
C [auth B]SCOP2B SuperfamilyTricorn protease domain 2 8037768 3000315 SCOP2B (2022-06-29)
C [auth B]SCOP2B SuperfamilyPDZ domain-like 8037766 3000388 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyClpP/crotonase 8037769 3000033 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPDZ domain-like 8037766 3000388 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyClpP/crotonase 8037769 3000033 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyTricorn protease N-terminal domain 8037767 3000291 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyTricorn protease domain 2 8037768 3000315 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
K [auth F]e1n6dF1 A: amino-terminal domain of OmpATbX: amino-terminal domain of OmpATbH: amino-terminal domain of OmpATbT: Lactamase_BF:ECOD (20:10:01)
I [auth E]e1n6dE1 A: amino-terminal domain of OmpATbX: amino-terminal domain of OmpATbH: amino-terminal domain of OmpATbT: Lactamase_BF:ECOD (20:10:01)
G [auth D]e1n6dD1 A: amino-terminal domain of OmpATbX: amino-terminal domain of OmpATbH: amino-terminal domain of OmpATbT: Lactamase_BF:ECOD (20:10:01)
E [auth C]e1n6dC1 A: amino-terminal domain of OmpATbX: amino-terminal domain of OmpATbH: amino-terminal domain of OmpATbT: Lactamase_BF:ECOD (20:10:01)
C [auth B]e1n6dB1 A: amino-terminal domain of OmpATbX: amino-terminal domain of OmpATbH: amino-terminal domain of OmpATbT: Lactamase_BF:ECOD (20:10:01)
Ae1n6dA1 A: amino-terminal domain of OmpATbX: amino-terminal domain of OmpATbH: amino-terminal domain of OmpATbT: Lactamase_BF:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
K [auth F]2.120.10.60 Mainly Beta 6 Propeller Neuraminidase Tricorn protease N-terminal domainCATH (4.3.0)
K [auth F]2.130.10.10 Mainly Beta 7 Propeller Methylamine Dehydrogenase Chain HCATH (4.3.0)
K [auth F]3.30.750.44 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA CATH (4.3.0)
K [auth F]2.30.42.10 Mainly Beta Roll Pdz3 Domain PDZ domainCATH (4.3.0)
K [auth F]3.90.226.10 Alpha Beta Alpha-Beta Complex 2-enoyl-CoA Hydratase Chain A, domain 1CATH (4.3.0)
I [auth E]2.120.10.60 Mainly Beta 6 Propeller Neuraminidase Tricorn protease N-terminal domainCATH (4.3.0)
I [auth E]2.130.10.10 Mainly Beta 7 Propeller Methylamine Dehydrogenase Chain HCATH (4.3.0)
I [auth E]3.30.750.44 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA CATH (4.3.0)
I [auth E]2.30.42.10 Mainly Beta Roll Pdz3 Domain PDZ domainCATH (4.3.0)
I [auth E]3.90.226.10 Alpha Beta Alpha-Beta Complex 2-enoyl-CoA Hydratase Chain A, domain 1CATH (4.3.0)
G [auth D]2.120.10.60 Mainly Beta 6 Propeller Neuraminidase Tricorn protease N-terminal domainCATH (4.3.0)
G [auth D]2.130.10.10 Mainly Beta 7 Propeller Methylamine Dehydrogenase Chain HCATH (4.3.0)
G [auth D]3.30.750.44 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA CATH (4.3.0)
G [auth D]2.30.42.10 Mainly Beta Roll Pdz3 Domain PDZ domainCATH (4.3.0)
G [auth D]3.90.226.10 Alpha Beta Alpha-Beta Complex 2-enoyl-CoA Hydratase Chain A, domain 1CATH (4.3.0)
E [auth C]2.120.10.60 Mainly Beta 6 Propeller Neuraminidase Tricorn protease N-terminal domainCATH (4.3.0)
E [auth C]2.130.10.10 Mainly Beta 7 Propeller Methylamine Dehydrogenase Chain HCATH (4.3.0)
E [auth C]3.30.750.44 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA CATH (4.3.0)
E [auth C]2.30.42.10 Mainly Beta Roll Pdz3 Domain PDZ domainCATH (4.3.0)
E [auth C]3.90.226.10 Alpha Beta Alpha-Beta Complex 2-enoyl-CoA Hydratase Chain A, domain 1CATH (4.3.0)
C [auth B]2.120.10.60 Mainly Beta 6 Propeller Neuraminidase Tricorn protease N-terminal domainCATH (4.3.0)
C [auth B]2.130.10.10 Mainly Beta 7 Propeller Methylamine Dehydrogenase Chain HCATH (4.3.0)
C [auth B]3.30.750.44 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA CATH (4.3.0)
C [auth B]2.30.42.10 Mainly Beta Roll Pdz3 Domain PDZ domainCATH (4.3.0)
C [auth B]3.90.226.10 Alpha Beta Alpha-Beta Complex 2-enoyl-CoA Hydratase Chain A, domain 1CATH (4.3.0)
A2.120.10.60 Mainly Beta 6 Propeller Neuraminidase Tricorn protease N-terminal domainCATH (4.3.0)
A2.130.10.10 Mainly Beta 7 Propeller Methylamine Dehydrogenase Chain HCATH (4.3.0)
A3.30.750.44 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA CATH (4.3.0)
A2.30.42.10 Mainly Beta Roll Pdz3 Domain PDZ domainCATH (4.3.0)
A3.90.226.10 Alpha Beta Alpha-Beta Complex 2-enoyl-CoA Hydratase Chain A, domain 1CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF03572Peptidase family S41 (Peptidase_S41)Peptidase family S41- Family
PF26550Tricorn protease second beta propeller domain (Tricorn_2nd)Tricorn protease second beta propeller domain- Repeat
PF14684Tricorn protease C1 domain (Tricorn_C1)Tricorn protease C1 domainThis domain is the C1 core domain of tricorn protease. This is a mixed alpha-beta domain [1]. Domain
PF14685Tricorn protease PDZ domain (PDZ_Tricorn)Tricorn protease PDZ domainThis domain is the PDZ domain of tricorn protease [1]. Domain
PF26549Tricorn protease N-terminal beta propeller domain (Tricorn_N)Tricorn protease N-terminal beta propeller domain- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
RVRK---
Tricorn protease

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR005151Tail specific proteaseDomain
IPR029045ClpP/crotonase-like domain superfamilyHomologous Superfamily
IPR028204Tricorn protease C1 domainDomain
IPR029414Tricorn protease, PDZ domainDomain
IPR012393Tricorn proteaseFamily
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IPR036034PDZ superfamilyHomologous Superfamily