1NU7
Staphylocoagulase-Thrombin Complex
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Trypsin-like serine proteases | 8042154 | 3000114 | SCOP2B (2022-06-29) |
E [auth F] | SCOP2B Superfamily | Trypsin-like serine proteases | 8042154 | 3000114 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | Staphylocoagulase | 8036996 | 3000792 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | Staphylocoagulase | 8036998 | 3000792 | SCOP2B (2022-06-29) |
F [auth H] | SCOP2B Superfamily | Staphylocoagulase | 8036998 | 3000792 | SCOP2B (2022-06-29) |
F [auth H] | SCOP2B Superfamily | Staphylocoagulase | 8036996 | 3000792 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth D] | Coagulase_C | e1nu7D2 | A: alpha bundles | X: immunoglobulin/albumin-binding domain-like | H: Staphylocoagulase (From Topology) | T: Staphylocoagulase | F: Coagulase_C | ECOD (1.6) |
C [auth D] | Coagulase_N | e1nu7D1 | A: alpha bundles | X: immunoglobulin/albumin-binding domain-like | H: Staphylocoagulase (From Topology) | T: Staphylocoagulase | F: Coagulase_N | ECOD (1.6) |
F [auth H] | Coagulase_C | e1nu7H2 | A: alpha bundles | X: immunoglobulin/albumin-binding domain-like | H: Staphylocoagulase (From Topology) | T: Staphylocoagulase | F: Coagulase_C | ECOD (1.6) |
F [auth H] | Coagulase_N | e1nu7H1 | A: alpha bundles | X: immunoglobulin/albumin-binding domain-like | H: Staphylocoagulase (From Topology) | T: Staphylocoagulase | F: Coagulase_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (4.3.0) |
E [auth F] | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (4.3.0) |
C [auth D] | 1.20.120.750 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Staphylcoagulase, helix bundle domain 1 | CATH (4.3.0) |
C [auth D] | 1.20.120.760 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Staphylcoagulase, helix bundle, domain 2 | CATH (4.3.0) |
F [auth H] | 1.20.120.750 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Staphylcoagulase, helix bundle domain 1 | CATH (4.3.0) |
F [auth H] | 1.20.120.760 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Staphylcoagulase, helix bundle, domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, D [auth E] | PF09396 | Thrombin light chain (Thrombin_light) | Thrombin light chain | Thrombin is an enzyme that cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII. Prothrombin is activated on the surface of a phospholipid membrane where factor Xa removes the activation peptide and cleave ... | Domain |
B, E [auth F] | PF00089 | Trypsin (Trypsin) | Trypsin | - | Domain |
C [auth D], F [auth H] | PF08764 | Staphylococcus aureus coagulase (Coagulase) | Staphylococcus aureus coagulase | Staphylococcus aureus secretes a cofactor called coagulase. Coagulase is an extracellular protein that forms a complex with human prothrombin, and activates it without the usual proteolytic cleavages. The resulting complex directly initiates blood c ... | Domain |