1PP6

VVA2 (STRIP CRYSTAL FORM)

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1pp6a_	Alpha and beta proteins (a+b)	CytB endotoxin-like	CytB endotoxin-like	CytB endotoxin-like	Volvatoxin A2	(Volvariella volvacea ) [TaxId: 36659 ],	SCOPe (2.08)
B	d1pp6b_	Alpha and beta proteins (a+b)	CytB endotoxin-like	CytB endotoxin-like	CytB endotoxin-like	Volvatoxin A2	(Volvariella volvacea ) [TaxId: 36659 ],	SCOPe (2.08)
C	d1pp6c_	Alpha and beta proteins (a+b)	CytB endotoxin-like	CytB endotoxin-like	CytB endotoxin-like	Volvatoxin A2	(Volvariella volvacea ) [TaxId: 36659 ],	SCOPe (2.08)
D	d1pp6d_	Alpha and beta proteins (a+b)	CytB endotoxin-like	CytB endotoxin-like	CytB endotoxin-like	Volvatoxin A2	(Volvariella volvacea ) [TaxId: 36659 ],	SCOPe (2.08)
E	d1pp6e_	Alpha and beta proteins (a+b)	CytB endotoxin-like	CytB endotoxin-like	CytB endotoxin-like	Volvatoxin A2	(Volvariella volvacea ) [TaxId: 36659 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	CytB endotoxin-like	8038206	3000359	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	CytB endotoxin-like	8038206	3000359	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	CytB endotoxin-like	8038206	3000359	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	CytB endotoxin-like	8038206	3000359	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	CytB endotoxin-like	8038206	3000359	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Bac_thur_toxin	e1pp6A1	A: a+b three layers	X: CytB endotoxin-like (Pfam 01338) (From Topology)	H: CytB endotoxin-like (Pfam 01338) (From Topology)	T: CytB endotoxin-like (Pfam 01338)	F: Bac_thur_toxin	ECOD (1.6)
B	Bac_thur_toxin	e1pp6B1	A: a+b three layers	X: CytB endotoxin-like (Pfam 01338) (From Topology)	H: CytB endotoxin-like (Pfam 01338) (From Topology)	T: CytB endotoxin-like (Pfam 01338)	F: Bac_thur_toxin	ECOD (1.6)
C	Bac_thur_toxin	e1pp6C1	A: a+b three layers	X: CytB endotoxin-like (Pfam 01338) (From Topology)	H: CytB endotoxin-like (Pfam 01338) (From Topology)	T: CytB endotoxin-like (Pfam 01338)	F: Bac_thur_toxin	ECOD (1.6)
D	Bac_thur_toxin	e1pp6D1	A: a+b three layers	X: CytB endotoxin-like (Pfam 01338) (From Topology)	H: CytB endotoxin-like (Pfam 01338) (From Topology)	T: CytB endotoxin-like (Pfam 01338)	F: Bac_thur_toxin	ECOD (1.6)
E	Bac_thur_toxin	e1pp6E1	A: a+b three layers	X: CytB endotoxin-like (Pfam 01338) (From Topology)	H: CytB endotoxin-like (Pfam 01338) (From Topology)	T: CytB endotoxin-like (Pfam 01338)	F: Bac_thur_toxin	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.198.10	Alpha Beta	3-Layer(aba) Sandwich	Delta-endotoxin CytB	Delta-endotoxin CytB-like	CATH (4.3.0)
B	3.40.198.10	Alpha Beta	3-Layer(aba) Sandwich	Delta-endotoxin CytB	Delta-endotoxin CytB-like	CATH (4.3.0)
C	3.40.198.10	Alpha Beta	3-Layer(aba) Sandwich	Delta-endotoxin CytB	Delta-endotoxin CytB-like	CATH (4.3.0)
D	3.40.198.10	Alpha Beta	3-Layer(aba) Sandwich	Delta-endotoxin CytB	Delta-endotoxin CytB-like	CATH (4.3.0)
E	3.40.198.10	Alpha Beta	3-Layer(aba) Sandwich	Delta-endotoxin CytB	Delta-endotoxin CytB-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E	PF01338	Bacillus thuringiensis toxin (Bac_thur_toxin)	Bacillus thuringiensis toxin		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E	Volvatoxin A2	-	sporulation resulting in formation of a cellular spore developmental process anatomical structure morphogenesis anatomical structure formation involved in morphogenesis anatomical structure development sporulation	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E	IPR001615	Delta-endotoxin CytB	Family
A, B, C, D, E	IPR035918	Delta-endotoxin CytB-like superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.