1RF5
Structural Studies of Streptococcus pneumoniae EPSP Synthase in Unliganded State
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1rf5a_ | Alpha and beta proteins (a+b) | IF3-like | EPT/RTPC-like | Enolpyruvate transferase, EPT | 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase | (Streptococcus pneumoniae ) [TaxId: 1313 ], | SCOPe (2.08) |
B | d1rf5b_ | Alpha and beta proteins (a+b) | IF3-like | EPT/RTPC-like | Enolpyruvate transferase, EPT | 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase | (Streptococcus pneumoniae ) [TaxId: 1313 ], | SCOPe (2.08) |
C | d1rf5c_ | Alpha and beta proteins (a+b) | IF3-like | EPT/RTPC-like | Enolpyruvate transferase, EPT | 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase | (Streptococcus pneumoniae ) [TaxId: 1313 ], | SCOPe (2.08) |
D | d1rf5d_ | Alpha and beta proteins (a+b) | IF3-like | EPT/RTPC-like | Enolpyruvate transferase, EPT | 5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase | (Streptococcus pneumoniae ) [TaxId: 1313 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | EPT/RTPC-like | 8040542 | 3001530 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | EPT/RTPC-like | 8040542 | 3001530 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | EPT/RTPC-like | 8040542 | 3001530 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | EPT/RTPC-like | 8040542 | 3001530 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | EPSP_synthase_N_1 | e1rf5A1 | A: a+b two layers | X: IF3-like | H: EPT/RTPC-like (From Topology) | T: EPT/RTPC-like | F: EPSP_synthase_N_1 | ECOD (1.6) |
A | EPSP_synthase_C | e1rf5A2 | A: a+b two layers | X: IF3-like | H: EPT/RTPC-like (From Topology) | T: EPT/RTPC-like | F: EPSP_synthase_C | ECOD (1.6) |
B | EPSP_synthase_N_1 | e1rf5B1 | A: a+b two layers | X: IF3-like | H: EPT/RTPC-like (From Topology) | T: EPT/RTPC-like | F: EPSP_synthase_N_1 | ECOD (1.6) |
B | EPSP_synthase_C | e1rf5B2 | A: a+b two layers | X: IF3-like | H: EPT/RTPC-like (From Topology) | T: EPT/RTPC-like | F: EPSP_synthase_C | ECOD (1.6) |
C | EPSP_synthase_N_1 | e1rf5C2 | A: a+b two layers | X: IF3-like | H: EPT/RTPC-like (From Topology) | T: EPT/RTPC-like | F: EPSP_synthase_N_1 | ECOD (1.6) |
C | EPSP_synthase_C | e1rf5C1 | A: a+b two layers | X: IF3-like | H: EPT/RTPC-like (From Topology) | T: EPT/RTPC-like | F: EPSP_synthase_C | ECOD (1.6) |
D | EPSP_synthase_N_1 | e1rf5D2 | A: a+b two layers | X: IF3-like | H: EPT/RTPC-like (From Topology) | T: EPT/RTPC-like | F: EPSP_synthase_N_1 | ECOD (1.6) |
D | EPSP_synthase_C | e1rf5D1 | A: a+b two layers | X: IF3-like | H: EPT/RTPC-like (From Topology) | T: EPT/RTPC-like | F: EPSP_synthase_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.65.10.10 | Alpha Beta | Alpha-beta prism | UDP-n-acetylglucosamine1-carboxyvinyl-transferase | Chain | CATH (4.3.0) |
B | 3.65.10.10 | Alpha Beta | Alpha-beta prism | UDP-n-acetylglucosamine1-carboxyvinyl-transferase | Chain | CATH (4.3.0) |
C | 3.65.10.10 | Alpha Beta | Alpha-beta prism | UDP-n-acetylglucosamine1-carboxyvinyl-transferase | Chain | CATH (4.3.0) |
D | 3.65.10.10 | Alpha Beta | Alpha-beta prism | UDP-n-acetylglucosamine1-carboxyvinyl-transferase | Chain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001986 | Enolpyruvate transferase domain | Domain | |
IPR013792 | RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta | Homologous Superfamily | |
IPR036968 | Enolpyruvate transferase domain superfamily | Homologous Superfamily | |
IPR006264 | 3-phosphoshikimate 1-carboxyvinyltransferase | Family | |
IPR023193 | 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site | Conserved Site |