Structure and function of phenazine-biosynthesis protein PhzF from Pseudomonas fluorescens 2-79
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d1u1xa1 | Alpha and beta proteins (a+b) | Diaminopimelate epimerase-like | Diaminopimelate epimerase-like | PhzC/PhzF-like | Phenazine biosynthesis protein PhzF | (Pseudomonas fluorescens ) [TaxId: 294 ], | SCOPe (2.08) |
| B | d1u1xb1 | Alpha and beta proteins (a+b) | Diaminopimelate epimerase-like | Diaminopimelate epimerase-like | PhzC/PhzF-like | Phenazine biosynthesis protein PhzF | (Pseudomonas fluorescens ) [TaxId: 294 ], | SCOPe (2.08) |
| B | d1u1xb3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Pseudomonas fluorescens ) [TaxId: 294 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2B Superfamily | Diaminopimelate epimerase-like | 8044168 | 3000573 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Diaminopimelate epimerase-like | 8044170 | 3000573 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Diaminopimelate epimerase-like | 8044168 | 3000573 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Diaminopimelate epimerase-like | 8044170 | 3000573 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Biotin_carb_C | e1u1xA1 | A: alpha bundles | X: EGF-like | H: LDL receptor-like module | T: LDL receptor-like module | F: Biotin_carb_C | ECOD (develop294) |
| B | Biotin_carb_C | e1u1xB1 | A: alpha bundles | X: EGF-like | H: LDL receptor-like module | T: LDL receptor-like module | F: Biotin_carb_C | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.10.310.10 | Alpha Beta | Roll | Diaminopimelate Epimerase | Chain A, domain 1 | CATH (4.3.0) |
| B | 3.10.310.10 | Alpha Beta | Roll | Diaminopimelate Epimerase | Chain A, domain 1 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Phenazine biosynthesis protein phzF |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR003719 | Phenazine biosynthesis PhzF-like | Family |
