1WOK | pdb_00001wok

Crystal structure of catalytic domain of human poly(ADP-ribose) polymerase complexed with a quinoxaline-type inhibitor


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyDomain of poly(ADP-ribose) polymerase 8036812 3000280 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyADP-ribosylation 8036814 3001208 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyDomain of poly(ADP-ribose) polymerase 8036812 3000280 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyADP-ribosylation 8036814 3001208 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyADP-ribosylation 8036814 3001208 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyDomain of poly(ADP-ribose) polymerase 8036812 3000280 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyADP-ribosylation 8036814 3001208 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyDomain of poly(ADP-ribose) polymerase 8036812 3000280 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ATFR_dimere1wokA1 A: a/b three-layered sandwichesX: ETN0001 domain-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF: TFR_dimerECOD (v294.1)
AMet_synt_B12e1wokA2 A: a/b three-layered sandwichesX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: Met_synt_B12ECOD (v294.1)
BTFR_dimere1wokB1 A: a/b three-layered sandwichesX: ETN0001 domain-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF: TFR_dimerECOD (v294.1)
BMet_synt_B12e1wokB2 A: a/b three-layered sandwichesX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: Met_synt_B12ECOD (v294.1)
CTFR_dimere1wokC1 A: a/b three-layered sandwichesX: ETN0001 domain-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF: TFR_dimerECOD (v294.1)
CMet_synt_B12e1wokC2 A: a/b three-layered sandwichesX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: Met_synt_B12ECOD (v294.1)
DTFR_dimere1wokD1 A: a/b three-layered sandwichesX: ETN0001 domain-likeH: Flavivirus capsid protein CT: Flavivirus capsid protein CF: TFR_dimerECOD (v294.1)
DMet_synt_B12e1wokD2 A: a/b three-layered sandwichesX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: Met_synt_B12ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF00644Poly(ADP-ribose) polymerase catalytic domain (PARP)Poly(ADP-ribose) polymerase catalytic domainPoly(ADP-ribose) polymerase catalyses the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ...Poly(ADP-ribose) polymerase catalyses the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component induced by DNA damage. The carboxyl-terminal region is the most highly conserved region of the protein. Experiments have shown that a carboxyl 40 kDa fragment is still catalytically active [2].
Domain
A, B, C, D
PF02877Poly(ADP-ribose) polymerase, regulatory domain (PARP_reg)Poly(ADP-ribose) polymerase, regulatory domainPoly(ADP-ribose) polymerase catalyses the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ...Poly(ADP-ribose) polymerase catalyses the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component induced by DNA damage. The carboxyl-terminal region is the most highly conserved region of the protein. Experiments have shown that a carboxyl 40 kDa fragment is still catalytically active [2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Poly [ADP-ribose] polymerase-1