1YY9 | pdb_00001yy9

Structure of the extracellular domain of the epidermal growth factor receptor in complex with the Fab fragment of cetuximab/Erbitux/IMC-C225


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyL domain-like 8038760 3001010 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGrowth factor receptor domain-like 8038763 3000398 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth D]Sigma_1_2e1yy9D1 A: alpha bundlesX: HTHH: NudixT: winged helix domainF: Sigma_1_2ECOD (develop294)
B [auth C]Sigma_1_2e1yy9C1 A: alpha bundlesX: HTHH: NudixT: winged helix domainF: Sigma_1_2ECOD (develop294)
AHexapep,Acetyltransf_11e1yy9A1 A: alpha bundlesX: EGF-likeH: LDL receptor-like moduleT: LDL receptor-like moduleF: Hexapep,Acetyltransf_11ECOD (develop294)
ASigma_1_2e1yy9A5 A: alpha bundlesX: HTHH: NudixT: winged helix domainF: Sigma_1_2ECOD (develop294)
APre-SETe1yy9A4 A: alpha bundlesX: amino-terminal domain of OmpATbH: amino-terminal domain of OmpATbT: amino-terminal domain of OmpATbF: Pre-SETECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
C [auth D]IMC-C225 VH-CH1 Chimeric (chimeric) IGHV2-2*03, IGHJ3*01, IGHG1*03 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-1_KAPPA IMGT (202610-0)
B [auth C]IMC-C225 L-KAPPA Chimeric (chimeric) IGKV5-48*01, IGKJ5*01, IGKC*01 V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA IG FAB-GAMMA-1_KAPPA IMGT (202610-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
C [auth D]Heavy ChainIGHV2 -epidermal growth factor receptorSAbDab (2026-03-20)
B [auth C]Light ChainIGKV5 Kappaepidermal growth factor receptorSAbDab (2026-03-20)

Thera-SAbDab Antibody Annotation Thera-SAbDab Database Homepage

ChainNameTargetProvenance Source
C [auth D] Tomuzotuximab EGFR/ERBB1/HER1, ERBB3/HER3Therapeutic SAbDab (2026-03-20)
B [auth C] Tomuzotuximab EGFR/ERBB1/HER1, ERBB3/HER3Therapeutic SAbDab (2026-03-20)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00757Furin-like cysteine rich region (Furin-like)Furin-like cysteine rich regionDomain
PF01030Receptor L domain (Recep_L_domain)Receptor L domain- Repeat
PF14843Growth factor receptor domain IV (GF_recep_IV)Growth factor receptor domain IVThis is the fourth extracellular domain of receptor tyrosine protein kinases. Interaction between this domain and the furin-like domain (Pfam:PF00757) regulates the binding of ligands to the receptor L domains (Pfam:PF01030) [1]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth D]Cetuximab Fab Heavy chain---
B [auth C]Cetuximab Fab Light chain---
Epidermal Growth Factor Receptor

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP00533