1OR8
Structure of the Predominant protein arginine methyltransferase PRMT1
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1or8a_ | Alpha and beta proteins (a/b) | S-adenosyl-L-methionine-dependent methyltransferases | S-adenosyl-L-methionine-dependent methyltransferases | Arginine methyltransferase | Protein arginine N-methyltransferase 1, PRMT1 | Norway rat (Rattus norvegicus ) [TaxId: 10116 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Arginine methyltransferase C-terminal oligomerisation domain-like | 8053430 | 3002184 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | S-adenosyl-L-methionine-dependent methyltransferases | 8034266 | 3000118 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PRMT5_C_1 | e1or8A3 | A: beta sandwiches | X: Arginine methyltransferase oligomerization subdomain (From Topology) | H: Arginine methyltransferase oligomerization subdomain (From Topology) | T: Arginine methyltransferase oligomerization subdomain | F: PRMT5_C_1 | ECOD (1.6) |
A | PrmA | e1or8A2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: PrmA | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.150 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Vaccinia Virus protein VP39 | CATH (4.3.0) |
A | 2.70.160.11 | Mainly Beta | Distorted Sandwich | Hnrnp arginine n-methyltransferase1 | Hnrnp arginine n-methyltransferase1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13649 | Methyltransferase domain (Methyltransf_25) | Methyltransferase domain | This family appears to be a methyltransferase domain. | Domain | |
PF22528 | Arginine methyltransferase oligomerization subdomain (PRMT_C) | Arginine methyltransferase oligomerization subdomain | This entry represents a domain found C-terminal in protein arginine methyltransferases. This domain is involved in oligomerisation. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR025799 | Protein arginine N-methyltransferase | Family | |
IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Homologous Superfamily | |
IPR041698 | Methyltransferase domain 25 | Domain |
Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage
Chains | Enzyme Name | Description | Catalytic Residues |
---|---|---|---|
type I protein arginine methyltransferase M-CSA #872 | This eukaryotic enzyme catalyses the sequential dimethylation of one of the terminal guanidino nitrogen atoms in arginine residues, resulting in formation of asymmetric dimethylarginine residues. | Defined by 4 residues: ASP:A-38 [auth A-51]GLU:A-131 [auth A-144]GLU:A-140 [auth A-153]HIS:A-280 [auth A-293] | EC: 2.1.1.125 (PDB Primary Data) EC: 2.1.1.319 (UniProt) |