Cryo-EM structure of DOCK11 complexed with Cdc42(G15A) and Cdc42(Q61L)-GTP in the membrane-bound state
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| F | SCOP2B Superfamily | Ras-like P-loop GTPases | 8057416 | 3002022 | SCOP2B (2022-06-29) |
| C [auth E] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8057416 | 3002022 | SCOP2B (2022-06-29) |
| E [auth D] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8057416 | 3002022 | SCOP2B (2022-06-29) |
| B [auth C] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8057416 | 3002022 | SCOP2B (2022-06-29) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| C [auth E], F | PF00071 | Ras family (Ras) | Ras family | Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motili ... | Domain |
| B [auth C], E [auth D] | PF00071 | Ras family (Ras) | Ras family | Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motili ... | Domain |
| A, D [auth B] | PF14429 | C2 domain in Dock180 and Zizimin proteins (DOCK-C2) | C2 domain in Dock180 and Zizimin proteins | The Dock180/Dock1 and Zizimin proteins are atypical GTP/GDP exchange factors for the small GTPases Rac and Cdc42 and are implicated cell-migration and phagocytosis. Across all Dock180 proteins, two regions are conserved: C-terminus termed CZH2 or DH ... | Domain |
| A, D [auth B] | PF20421 | DHR-2, Lobe C (DHR-2_Lobe_C) | DHR-2, Lobe C | - | Repeat |
| A, D [auth B] | PF06920 | DHR-2, Lobe A (DHR-2_Lobe_A) | DHR-2, Lobe A | - | Repeat |
| A, D [auth B] | PF11878 | Dedicator of cytokinesis C/D, N terminal (DOCK_C-D_N) | Dedicator of cytokinesis C/D, N terminal | This entry represents the N-terminal domain of the DOCK-C subfamily (DOCK 6, 7, 8) and DOCK-D subfamily (DOCK 9, 10, 11). DOCK family members are evolutionarily conserved guanine nucleotide exchange factors (GEFs) for Rho-family GTPases [1,2], requir ... | Domain |
| A, D [auth B] | PF20422 | DHR-2, Lobe B (DHR-2_Lobe_B) | DHR-2, Lobe B | DOCK (dedicator of cytokinesis) proteins are guanine nucleotide exchange factors (GEFs) that activate some small GTPases, such as Rac or Cdc42, by exchanging bound GDP for free GTP to control cell migration, morphogenesis, and phagocytosis. These pro ... | Domain |