2AG4
Crystal Structure Analysis of GM2-activator protein complexed with phosphatidylcholine
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
- Membrane Protein Annotation: OPM
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2ag4a2 | All beta proteins | Ganglioside M2 (gm2) activator | Ganglioside M2 (gm2) activator | Ganglioside M2 (gm2) activator | Ganglioside M2 (gm2) activator | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d2ag4a3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d2ag4b2 | All beta proteins | Ganglioside M2 (gm2) activator | Ganglioside M2 (gm2) activator | Ganglioside M2 (gm2) activator | Ganglioside M2 (gm2) activator | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d2ag4b3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | ganglioside m2 (gm2) activator | 8024614 | 4003161 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Ganglioside M2 (gm2) activator | 8036993 | 3000364 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Ganglioside M2 (gm2) activator | 8036993 | 3000364 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | E1_DerP2_DerF2 | e2ag4A1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: E1_DerP2_DerF2 | ECOD (1.6) |
B | E1_DerP2_DerF2 | e2ag4B1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: E1_DerP2_DerF2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.70.220.10 | Mainly Beta | Distorted Sandwich | Ganglioside M2 Activator Protein | Chain: A, | CATH (4.3.0) |
B | 2.70.220.10 | Mainly Beta | Distorted Sandwich | Ganglioside M2 Activator Protein | Chain: A, | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02221 | ML domain (E1_DerP2_DerF2) | ML domain | ML domain - MD-2-related lipid recognition domain. This family consists of proteins from plants, animals and fungi, including dust mite allergen Der P 2 (Swiss:P49278). It has been implicate in lipid recognition, particularly in the recognition of pa ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR028996 | Ganglioside GM2 activator | Family | |
IPR003172 | MD-2-related lipid-recognition domain | Domain | |
IPR036846 | GM2-AP, lipid-recognition domain superfamily | Homologous Superfamily |
Pharos: Disease Associations Pharos Homepage Annotation
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Monotopic/peripheral | All beta monotopic/peripheral | Immunoglobulin-like superfamily (E set) | ML domain |