Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad2axta1 Membrane and cell surface proteins and peptides Bacterial photosystem II reaction centre, L and M subunits Bacterial photosystem II reaction centre, L and M subunits Bacterial photosystem II reaction centre, L and M subunits Photosystem Q(B) protein 1, PsbA1 (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
J [auth K]d2axtk1 Membrane and cell surface proteins and peptides Single transmembrane helix Photosystem II reaction center protein K, PsbK PsbK-like Photosystem II reaction center protein K, PsbK (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
K [auth L]d2axtl1 Membrane and cell surface proteins and peptides Single transmembrane helix Photosystem II reaction center protein L, PsbL PsbL-like Photosystem II reaction center protein L, PsbL (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
L [auth M]d2axtm1 Membrane and cell surface proteins and peptides Single transmembrane helix Photosystem II reaction center protein M, PsbM PsbM-like Photosystem II reaction center protein M, PsbM (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
M [auth O]d2axto1 Membrane and cell surface proteins and peptides Transmembrane beta-barrels OMPA-like PsbO-like Manganese-stabilising protein, PsbO (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
N [auth T]d2axtt1 Membrane and cell surface proteins and peptides Single transmembrane helix Photosystem II reaction center protein T, PsbT PsbT-like Photosystem II reaction center protein T, PsbT (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
O [auth U]d2axtu1 All alpha proteins SAM domain-like PsbU/PolX domain-like PsbU-like Photosystem II 12 kDa extrinsic protein PsbU (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
P [auth V]d2axtv_ All alpha proteins Cytochrome c Cytochrome c monodomain cytochrome c automated matches (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
R [auth Z]d2axtz1 Membrane and cell surface proteins and peptides Transmembrane helix hairpin PsbZ-like PsbZ-like Photosystem II reaction center protein Z, PsbZ (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
Bd2axtb1 Membrane and cell surface proteins and peptides Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II core light harvesting protein PsbB (Thermosynechococcus vestitus BP-1 ) [TaxId: 197221 ], SCOPe (2.08)
Cd2axtc1 Membrane and cell surface proteins and peptides Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II CP43 protein PsbC (Thermosynechococcus vestitus BP-1 ) [TaxId: 197221 ], SCOPe (2.08)
Dd2axtd1 Membrane and cell surface proteins and peptides Bacterial photosystem II reaction centre, L and M subunits Bacterial photosystem II reaction centre, L and M subunits Bacterial photosystem II reaction centre, L and M subunits Photosystem II reaction center d2 protein PsbD2 (Thermosynechococcus vestitus BP-1 ) [TaxId: 197221 ], SCOPe (2.08)
Ed2axte1 Membrane and cell surface proteins and peptides Single transmembrane helix Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunit alpha, PsbE (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
Fd2axtf1 Membrane and cell surface proteins and peptides Single transmembrane helix Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunit beta, PsbF (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
G [auth H]d2axth1 Membrane and cell surface proteins and peptides Single transmembrane helix Photosystem II 10 kDa phosphoprotein PsbH PsbH-like Photosystem II reaction center protein H, PsbH (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
H [auth I]d2axti1 Membrane and cell surface proteins and peptides Single transmembrane helix Photosystem II reaction center protein I, PsbI PsbI-like Photosystem II reaction center protein I, PsbI (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)
I [auth J]d2axtj1 Membrane and cell surface proteins and peptides Single transmembrane helix Photosystem II reaction center protein J, PsbJ PsbJ-like Photosystem II reaction center protein J, PsbJ (Thermosynechococcus vestitus ) [TaxId: 146786 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
S [auth a]SCOP2B SuperfamilyBacterial photosystem II reaction centre, L and M subunits 8032741 3000736 SCOP2B (2022-06-29)
ASCOP2 FamilyBacterial photosystem II reaction centre, L and M subunits 8020361 4002035 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyBacterial photosystem II reaction centre, L and M subunits 8032741 3000736 SCOP2 (2022-06-29)
BA [auth k]SCOP2B SuperfamilyPhotosystem II reaction center protein K, PsbK 8032757 3001585 SCOP2B (2022-06-29)
J [auth K]SCOP2 FamilyPsbK-like 8020377 4002673 SCOP2 (2022-06-29)
J [auth K]SCOP2 SuperfamilyPhotosystem II reaction center protein K, PsbK 8032757 3001585 SCOP2 (2022-06-29)
K [auth L]SCOP2 FamilyPsbL-like 8020379 4002634 SCOP2 (2022-06-29)
K [auth L]SCOP2 SuperfamilyPhotosystem II reaction center protein L, PsbL 8032759 3001523 SCOP2 (2022-06-29)
CA [auth l]SCOP2B SuperfamilyPhotosystem II reaction center protein L, PsbL 8032759 3001523 SCOP2B (2022-06-29)
DA [auth m]SCOP2B SuperfamilyPhotosystem II reaction center protein M, PsbM 8032762 3001573 SCOP2B (2022-06-29)
L [auth M]SCOP2 FamilyPsbM-like 8020382 4002664 SCOP2 (2022-06-29)
L [auth M]SCOP2 SuperfamilyPhotosystem II reaction center protein M, PsbM 8032762 3001573 SCOP2 (2022-06-29)
M [auth O]SCOP2 FamilyPsbO-like 8020385 4002770 SCOP2 (2022-06-29)
M [auth O]SCOP2 SuperfamilyOMPA barrel-like 8032765 3000208 SCOP2 (2022-06-29)
EA [auth o]SCOP2B SuperfamilyOMPA barrel-like 8032765 3000208 SCOP2B (2022-06-29)
FA [auth t]SCOP2B SuperfamilyPhotosystem II reaction center protein T, PsbT 8032769 3001561 SCOP2B (2022-06-29)
N [auth T]SCOP2 FamilyPsbT-like 8020389 4002656 SCOP2 (2022-06-29)
N [auth T]SCOP2 SuperfamilyPhotosystem II reaction center protein T, PsbT 8032769 3001561 SCOP2 (2022-06-29)
O [auth U]SCOP2 FamilyPsbU-like 8020388 4001403 SCOP2 (2022-06-29)
O [auth U]SCOP2 SuperfamilyPsbU/PolX domain-like 8032768 3000893 SCOP2 (2022-06-29)
GA [auth u]SCOP2B SuperfamilyPsbU/PolX domain-like 8032768 3000893 SCOP2B (2022-06-29)
HA [auth v]SCOP2B SuperfamilyCytochrome c 8036565 3000815 SCOP2B (2022-06-29)
P [auth V]SCOP2B SuperfamilyCytochrome c 8036565 3000815 SCOP2B (2022-06-29)
JA [auth z]SCOP2B SuperfamilyPsbZ-like 8032770 3001624 SCOP2B (2022-06-29)
R [auth Z]SCOP2 FamilyPsbZ-like 8020390 4002701 SCOP2 (2022-06-29)
R [auth Z]SCOP2 SuperfamilyPsbZ-like 8032770 3001624 SCOP2 (2022-06-29)
T [auth b]SCOP2B SuperfamilyPhotosystem II antenna protein-like 8032743 3001674 SCOP2B (2022-06-29)
BSCOP2 FamilyPhotosystem II antenna protein-like 8020363 4002735 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyPhotosystem II antenna protein-like 8032743 3001674 SCOP2 (2022-06-29)
CSCOP2 FamilyPhotosystem II antenna protein-like 8020366 4002735 SCOP2 (2022-06-29)
CSCOP2 SuperfamilyPhotosystem II antenna protein-like 8032746 3001674 SCOP2 (2022-06-29)
U [auth c]SCOP2B SuperfamilyPhotosystem II antenna protein-like 8032746 3001674 SCOP2B (2022-06-29)
DSCOP2 FamilyBacterial photosystem II reaction centre, L and M subunits 8020370 4002035 SCOP2 (2022-06-29)
DSCOP2 SuperfamilyBacterial photosystem II reaction centre, L and M subunits 8032750 3000736 SCOP2 (2022-06-29)
V [auth d]SCOP2B SuperfamilyBacterial photosystem II reaction centre, L and M subunits 8032750 3000736 SCOP2B (2022-06-29)
ESCOP2 FamilyCytochrome b559 subunits 8020369 4002681 SCOP2 (2022-06-29)
ESCOP2 SuperfamilyCytochrome b559 subunits 8032749 3001602 SCOP2 (2022-06-29)
W [auth e]SCOP2B SuperfamilyCytochrome b559 subunits 8032749 3001602 SCOP2B (2022-06-29)
FSCOP2 FamilyCytochrome b559 subunits 8020372 4002681 SCOP2 (2022-06-29)
FSCOP2 SuperfamilyCytochrome b559 subunits 8032752 3001602 SCOP2 (2022-06-29)
X [auth f]SCOP2B SuperfamilyCytochrome b559 subunits 8032752 3001602 SCOP2B (2022-06-29)
Y [auth h]SCOP2B SuperfamilyPhotosystem II 10 kDa phosphoprotein PsbH 8032753 3001547 SCOP2B (2022-06-29)
G [auth H]SCOP2 FamilyPsbH-like 8020373 4002649 SCOP2 (2022-06-29)
G [auth H]SCOP2 SuperfamilyPhotosystem II 10 kDa phosphoprotein PsbH 8032753 3001547 SCOP2 (2022-06-29)
H [auth I]SCOP2 FamilyPsbI-like 8020374 4002676 SCOP2 (2022-06-29)
H [auth I]SCOP2 SuperfamilyPhotosystem II reaction center protein I, PsbI 8032754 3001590 SCOP2 (2022-06-29)
Z [auth i]SCOP2B SuperfamilyPhotosystem II reaction center protein I, PsbI 8032754 3001590 SCOP2B (2022-06-29)
AA [auth j]SCOP2B SuperfamilyPhotosystem II reaction center protein J, PsbJ 8032755 3001534 SCOP2B (2022-06-29)
I [auth J]SCOP2 FamilyPsbJ-like 8020375 4002642 SCOP2 (2022-06-29)
I [auth J]SCOP2 SuperfamilyPhotosystem II reaction center protein J, PsbJ 8032755 3001534 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
S [auth a]Photo_RCe2axta1 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: Photo_RCECOD (1.6)
APhoto_RCe2axtA1 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: Photo_RCECOD (1.6)
BA [auth k]PsbKe2axtk1 A: extended segmentsX: Photosystem II reaction center protein K, PsbK (From Topology)H: Photosystem II reaction center protein K, PsbK (From Topology)T: Photosystem II reaction center protein K, PsbKF: PsbKECOD (1.6)
J [auth K]PsbKe2axtK1 A: extended segmentsX: Photosystem II reaction center protein K, PsbK (From Topology)H: Photosystem II reaction center protein K, PsbK (From Topology)T: Photosystem II reaction center protein K, PsbKF: PsbKECOD (1.6)
K [auth L]PsbLe2axtL1 A: extended segmentsX: Photosystem II reaction center protein L, PsbL (From Topology)H: Photosystem II reaction center protein L, PsbL (From Topology)T: Photosystem II reaction center protein L, PsbLF: PsbLECOD (1.6)
CA [auth l]PsbLe2axtl1 A: extended segmentsX: Photosystem II reaction center protein L, PsbL (From Topology)H: Photosystem II reaction center protein L, PsbL (From Topology)T: Photosystem II reaction center protein L, PsbLF: PsbLECOD (1.6)
DA [auth m]PsbMe2axtm1 A: extended segmentsX: Photosystem II reaction center protein M, PsbM (From Topology)H: Photosystem II reaction center protein M, PsbM (From Topology)T: Photosystem II reaction center protein M, PsbMF: PsbMECOD (1.6)
L [auth M]PsbMe2axtM1 A: extended segmentsX: Photosystem II reaction center protein M, PsbM (From Topology)H: Photosystem II reaction center protein M, PsbM (From Topology)T: Photosystem II reaction center protein M, PsbMF: PsbMECOD (1.6)
M [auth O]MSPe2axtO1 A: beta barrelsX: Outer membrane meander beta-barrelsH: OMPA-like (From Topology)T: OMPA-likeF: MSPECOD (1.6)
EA [auth o]MSPe2axto1 A: beta barrelsX: Outer membrane meander beta-barrelsH: OMPA-like (From Topology)T: OMPA-likeF: MSPECOD (1.6)
FA [auth t]PsbTe2axtt1 A: extended segmentsX: Photosystem II reaction center protein T, PsbT (From Topology)H: Photosystem II reaction center protein T, PsbT (From Topology)T: Photosystem II reaction center protein T, PsbTF: PsbTECOD (1.6)
N [auth T]PsbTe2axtT1 A: extended segmentsX: Photosystem II reaction center protein T, PsbT (From Topology)H: Photosystem II reaction center protein T, PsbT (From Topology)T: Photosystem II reaction center protein T, PsbTF: PsbTECOD (1.6)
O [auth U]PsbUe2axtU1 A: alpha arraysX: HhH/H2THH: SAM/DNA-glycosylaseT: SAM domain-likeF: PsbUECOD (1.6)
GA [auth u]PsbUe2axtu1 A: alpha arraysX: HhH/H2THH: SAM/DNA-glycosylaseT: SAM domain-likeF: PsbUECOD (1.6)
HA [auth v]Cytochrom_C550e2axtv1 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: Cytochrom_C550ECOD (1.6)
P [auth V]Cytochrom_C550e2axtV1 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: Cytochrom_C550ECOD (1.6)
JA [auth z]Ycf9e2axtz1 A: extended segmentsX: PsbZ-like (From Topology)H: PsbZ-like (From Topology)T: PsbZ-likeF: Ycf9ECOD (1.6)
R [auth Z]Ycf9e2axtZ1 A: extended segmentsX: PsbZ-like (From Topology)H: PsbZ-like (From Topology)T: PsbZ-likeF: Ycf9ECOD (1.6)
T [auth b]PSII_1ste2axtb1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PSII_1stECOD (1.6)
T [auth b]PSII_2nde2axtb2 A: a+b two layersX: Photosystem II antenna protein PsbB insertion domain (From Topology)H: Photosystem II antenna protein PsbB insertion domain (From Topology)T: Photosystem II antenna protein PsbB insertion domainF: PSII_2ndECOD (1.6)
BPSII_1ste2axtB2 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PSII_1stECOD (1.6)
BPSII_2nde2axtB3 A: a+b two layersX: Photosystem II antenna protein PsbB insertion domain (From Topology)H: Photosystem II antenna protein PsbB insertion domain (From Topology)T: Photosystem II antenna protein PsbB insertion domainF: PSII_2ndECOD (1.6)
CPSII_1ste2axtC1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PSII_1stECOD (1.6)
U [auth c]PSII_1ste2axtc1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PSII_1stECOD (1.6)
DPhoto_RCe2axtD1 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: Photo_RCECOD (1.6)
V [auth d]Photo_RCe2axtd1 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: Photo_RCECOD (1.6)
ECytochrom_B559ae2axtE1 A: extended segmentsX: Cytochrome b559 subunits (From Topology)H: Cytochrome b559 subunits (From Topology)T: Cytochrome b559 subunitsF: Cytochrom_B559aECOD (1.6)
W [auth e]Cytochrom_B559ae2axte1 A: extended segmentsX: Cytochrome b559 subunits (From Topology)H: Cytochrome b559 subunits (From Topology)T: Cytochrome b559 subunitsF: Cytochrom_B559aECOD (1.6)
FCytochrom_B559e2axtF1 A: extended segmentsX: Cytochrome b559 subunits (From Topology)H: Cytochrome b559 subunits (From Topology)T: Cytochrome b559 subunitsF: Cytochrom_B559ECOD (1.6)
X [auth f]Cytochrom_B559e2axtf1 A: extended segmentsX: Cytochrome b559 subunits (From Topology)H: Cytochrome b559 subunits (From Topology)T: Cytochrome b559 subunitsF: Cytochrom_B559ECOD (1.6)
Y [auth h]PsbHe2axth1 A: extended segmentsX: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)H: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)T: Photosystem II 10 kDa phosphoprotein PsbHF: PsbHECOD (1.6)
G [auth H]PsbHe2axtH1 A: extended segmentsX: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)H: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)T: Photosystem II 10 kDa phosphoprotein PsbHF: PsbHECOD (1.6)
H [auth I]PsbIe2axtI1 A: extended segmentsX: Photosystem II reaction center protein I, PsbI (From Topology)H: Photosystem II reaction center protein I, PsbI (From Topology)T: Photosystem II reaction center protein I, PsbIF: PsbIECOD (1.6)
Z [auth i]PsbIe2axti1 A: extended segmentsX: Photosystem II reaction center protein I, PsbI (From Topology)H: Photosystem II reaction center protein I, PsbI (From Topology)T: Photosystem II reaction center protein I, PsbIF: PsbIECOD (1.6)
AA [auth j]PsbJe2axtj1 A: extended segmentsX: Photosystem II reaction center protein J, PsbJ (From Topology)H: Photosystem II reaction center protein J, PsbJ (From Topology)T: Photosystem II reaction center protein J, PsbJF: PsbJECOD (1.6)
I [auth J]PsbJe2axtJ1 A: extended segmentsX: Photosystem II reaction center protein J, PsbJ (From Topology)H: Photosystem II reaction center protein J, PsbJ (From Topology)T: Photosystem II reaction center protein J, PsbJF: PsbJECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
M [auth O]2.40.160.30 Mainly Beta Beta Barrel Porin Photosystem II, cytochrome c-550 precursorCATH (4.3.0)
M [auth O]3.30.2050.10 Alpha Beta 2-Layer Sandwich photosynthetic oxygen evolving center fold photosynthetic oxygen evolving center domainCATH (4.3.0)
EA [auth o]2.40.160.30 Mainly Beta Beta Barrel Porin Photosystem II, cytochrome c-550 precursorCATH (4.3.0)
EA [auth o]3.30.2050.10 Alpha Beta 2-Layer Sandwich photosynthetic oxygen evolving center fold photosynthetic oxygen evolving center domainCATH (4.3.0)
O [auth U]1.10.150.320 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)
GA [auth u]1.10.150.320 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)
HA [auth v]1.10.760.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain D, domain 2CATH (4.3.0)
P [auth V]1.10.760.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain D, domain 2CATH (4.3.0)
JA [auth z]1.10.287.740 Mainly Alpha Orthogonal Bundle Helix Hairpins Photosystem II PsbZ, reaction centreCATH (4.3.0)
R [auth Z]1.10.287.740 Mainly Alpha Orthogonal Bundle Helix Hairpins Photosystem II PsbZ, reaction centreCATH (4.3.0)
T [auth b]3.10.680.10 Alpha Beta Roll Photosystem II CP47 reaction center protein Photosystem II CP47 reaction center proteinCATH (4.3.0)
B3.10.680.10 Alpha Beta Roll Photosystem II CP47 reaction center protein Photosystem II CP47 reaction center proteinCATH (4.3.0)
C1.10.10.670 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A photosystem ii from thermosynechococcus elongatusCATH (4.3.0)
U [auth c]1.10.10.670 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A photosystem ii from thermosynechococcus elongatusCATH (4.3.0)
E1.20.5.860 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Photosystem II cytochrome b559, alpha subunitCATH (4.3.0)
W [auth e]1.20.5.860 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Photosystem II cytochrome b559, alpha subunitCATH (4.3.0)
Y [auth h]1.20.5.880 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Photosystem II reaction center protein HCATH (4.3.0)
G [auth H]1.20.5.880 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Photosystem II reaction center protein HCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
S [auth a]
PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
BA [auth k],
J [auth K]
PF02533Photosystem II 4 kDa reaction centre component (PsbK)Photosystem II 4 kDa reaction centre component- Family
CA [auth l],
K [auth L]
PF02419PsbL protein (PsbL)PsbL protein- Family
DA [auth m],
L [auth M]
PF05151Photosystem II reaction centre M protein (PsbM) (PsbM)Photosystem II reaction centre M protein (PsbM)- Family
FA [auth t],
N [auth T]
PF01405Photosystem II reaction centre T protein (PsbT)Photosystem II reaction centre T protein- Family
GA [auth u],
O [auth U]
PF06514Photosystem II 12 kDa extrinsic protein (PsbU) (PsbU)Photosystem II 12 kDa extrinsic protein (PsbU)- Family
HA [auth v],
P [auth V]
PF14495Cytochrome c-550 domain (Cytochrom_C550)Cytochrome c-550 domainThis domain is a heme binding cytochrome known as cytochrome c550, or cytochrome c549, or PsbV [1].Domain
JA [auth z],
R [auth Z]
PF01737YCF9 (Ycf9)YCF9- Family
C,
U [auth c]
PF00421Photosystem II protein (PSII)Photosystem II protein- Family
D,
V [auth d]
PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
E,
W [auth e]
PF00283Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits (Cytochrom_B559)Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits- Family
E,
W [auth e]
PF00284Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit (Cytochrom_B559a)Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit- Family
G [auth H],
Y [auth h]
PF00737Photosystem II 10 kDa phosphoprotein (PsbH)Photosystem II 10 kDa phosphoprotein- Family
H [auth I],
Z [auth i]
PF02532Photosystem II reaction centre I protein (PSII 4.8 kDa protein) (PsbI)Photosystem II reaction centre I protein (PSII 4.8 kDa protein)- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
S [auth a]
Photosystem Q(B) protein
BA [auth k],
J [auth K]
Photosystem II reaction center protein K-
CA [auth l],
K [auth L]
Photosystem II reaction center L protein-
DA [auth m],
L [auth M]
Photosystem II reaction center M protein-
EA [auth o],
M [auth O]
Photosystem II manganese-stabilizing polypeptide
FA [auth t],
N [auth T]
Photosystem II reaction center T protein-
GA [auth u],
O [auth U]
Photosystem II 12 kDa extrinsic protein-
HA [auth v],
P [auth V]
Cytochrome c-550
IA [auth x],
Q [auth X]
Unassigned subunits---
JA [auth z],
R [auth Z]
Photosystem II reaction center Z protein-
B,
T [auth b]
CP47 protein
C,
U [auth c]
photosystem II CP43 protein
D,
V [auth d]
photosystem II reaction center D2 protein
E,
W [auth e]
Cytochrome b559 alpha subunit
F,
X [auth f]
Cytochrome b559 beta subunit
G [auth H],
Y [auth h]
Photosystem II reaction center H protein
H [auth I],
Z [auth i]
Photosystem II reaction center I protein-
AA [auth j],
I [auth J]
Photosystem II reaction center J protein-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
S [auth a]
IPR005867Photosystem II protein D1Family
A,
S [auth a]
IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
A,
S [auth a]
IPR000484Photosynthetic reaction centre, L/MFamily
BA [auth k],
J [auth K]
IPR037270Photosystem II PsbK superfamilyHomologous Superfamily
BA [auth k],
J [auth K]
IPR003687Photosystem II PsbKFamily
CA [auth l],
K [auth L]
IPR003372Photosystem II PsbLFamily
CA [auth l],
K [auth L]
IPR037266Photosystem II PsbL superfamilyHomologous Superfamily
DA [auth m],
L [auth M]
IPR007826Photosystem II PsbMFamily
DA [auth m],
L [auth M]
IPR037269Photosystem II PsbM superfamilyHomologous Superfamily
EA [auth o],
M [auth O]
IPR011250Outer membrane protein/outer membrane enzyme PagP, beta-barrelHomologous Superfamily
EA [auth o],
M [auth O]
IPR002628Photosystem II extrinsic protein OFamily
FA [auth t],
N [auth T]
IPR001743Photosystem II PsbTFamily
FA [auth t],
N [auth T]
IPR037268Photosystem II PsbT superfamilyHomologous Superfamily
GA [auth u],
O [auth U]
IPR010527Photosystem II PsbU, oxygen evolving complexFamily
HA [auth v],
P [auth V]
IPR017851Photosystem II extrinsic protein V, cytochrome c-550 precursorFamily
HA [auth v],
P [auth V]
IPR016003Photosystem II extrinsic protein V, cytochrome c-550 precursor-likeFamily
HA [auth v],
P [auth V]
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
HA [auth v],
P [auth V]
IPR009056Cytochrome c-like domainDomain
HA [auth v],
P [auth V]
IPR029490Cytochrome c-550 domainDomain
JA [auth z],
R [auth Z]
IPR036512Photosystem II PsbZ superfamilyHomologous Superfamily
JA [auth z],
R [auth Z]
IPR002644Photosystem II PsbZ, reaction centreFamily
B,
T [auth b]
IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
B,
T [auth b]
IPR000932Photosystem antenna protein-likeFamily
B,
T [auth b]
IPR017486Photosystem II CP47 reaction centre proteinFamily
C,
U [auth c]
IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
C,
U [auth c]
IPR000932Photosystem antenna protein-likeFamily
C,
U [auth c]
IPR005869Photosystem II CP43 reaction centre proteinFamily
C,
U [auth c]
IPR044900Photosystem II CP43 reaction centre protein superfamilyHomologous Superfamily
D,
V [auth d]
IPR005868Photosystem II D2Family
D,
V [auth d]
IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
D,
V [auth d]
IPR000484Photosynthetic reaction centre, L/MFamily
E,
W [auth e]
IPR013081Photosystem II cytochrome b559, N-terminalDomain
E,
W [auth e]
IPR006217Photosystem II cytochrome b559, alpha subunitFamily
E,
W [auth e]
IPR013082Photosystem II cytochrome b559, alpha subunit, lumenal regionDomain
E,
W [auth e]
IPR037025Photosystem II cytochrome b559, alpha subunit superfamilyHomologous Superfamily
E,
W [auth e]
IPR006216Photosystem II cytochrome b559, conserved siteConserved Site
F,
X [auth f]
IPR006241Photosystem II cytochrome b559, beta subunitFamily
F,
X [auth f]
IPR013081Photosystem II cytochrome b559, N-terminalDomain
F,
X [auth f]
IPR006216Photosystem II cytochrome b559, conserved siteConserved Site
G [auth H],
Y [auth h]
IPR036863Photosystem II reaction centre protein H superfamilyHomologous Superfamily
G [auth H],
Y [auth h]
IPR001056Photosystem II reaction centre protein HFamily
H [auth I],
Z [auth i]
IPR037271Photosystem II PsbI superfamilyHomologous Superfamily
H [auth I],
Z [auth i]
IPR003686Photosystem II PsbIFamily
AA [auth j],
I [auth J]
IPR002682Photosystem II PsbJFamily
AA [auth j],
I [auth J]
IPR037267Photosystem II PsbJ superfamilyHomologous Superfamily