2BGN | pdb_00002bgn

HIV-1 Tat protein derived N-terminal nonapeptide Trp2-Tat(1-9) bound to the active site of Dipeptidyl peptidase IV (CD26)


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Dd2bgnd1 All beta proteins 8-bladed beta-propeller DPP6 N-terminal domain-like DPP6 N-terminal domain-like Dipeptidyl peptidase IV/CD26, N-terminal domain HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Dd2bgnd2 Alpha and beta proteins (a/b) alpha/beta-Hydrolases alpha/beta-Hydrolases DPP6 catalytic domain-like Dipeptidyl peptidase IV/CD26, C-terminal domain HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Cd2bgnc1 All beta proteins 8-bladed beta-propeller DPP6 N-terminal domain-like DPP6 N-terminal domain-like Dipeptidyl peptidase IV/CD26, N-terminal domain HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Cd2bgnc2 Alpha and beta proteins (a/b) alpha/beta-Hydrolases alpha/beta-Hydrolases DPP6 catalytic domain-like Dipeptidyl peptidase IV/CD26, C-terminal domain HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Bd2bgnb1 All beta proteins 8-bladed beta-propeller DPP6 N-terminal domain-like DPP6 N-terminal domain-like Dipeptidyl peptidase IV/CD26, N-terminal domain HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Bd2bgnb2 Alpha and beta proteins (a/b) alpha/beta-Hydrolases alpha/beta-Hydrolases DPP6 catalytic domain-like Dipeptidyl peptidase IV/CD26, C-terminal domain HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ad2bgna1 All beta proteins 8-bladed beta-propeller DPP6 N-terminal domain-like DPP6 N-terminal domain-like Dipeptidyl peptidase IV/CD26, N-terminal domain HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ad2bgna2 Alpha and beta proteins (a/b) alpha/beta-Hydrolases alpha/beta-Hydrolases DPP6 catalytic domain-like Dipeptidyl peptidase IV/CD26, C-terminal domain HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Hd2bgnh1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Metallo-dependent hydrolases Adenosine/AMP deaminase Adenosine deaminase (ADA) (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Gd2bgng1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Metallo-dependent hydrolases Adenosine/AMP deaminase Adenosine deaminase (ADA) (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Fd2bgnf1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Metallo-dependent hydrolases Adenosine/AMP deaminase Adenosine deaminase (ADA) (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Ed2bgne1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Metallo-dependent hydrolases Adenosine/AMP deaminase Adenosine deaminase (ADA) (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyDPP6 N-terminal domain-like 8039749 3001705 SCOP2B (2022-06-29)
DSCOP2B Superfamilyalpha/beta-Hydrolases 8039750 3000102 SCOP2B (2022-06-29)
CSCOP2B Superfamilyalpha/beta-Hydrolases 8039750 3000102 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyDPP6 N-terminal domain-like 8039749 3001705 SCOP2B (2022-06-29)
BSCOP2B Superfamilyalpha/beta-Hydrolases 8039750 3000102 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyDPP6 N-terminal domain-like 8039749 3001705 SCOP2B (2022-06-29)
ASCOP2B Superfamilyalpha/beta-Hydrolases 8039750 3000102 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyDPP6 N-terminal domain-like 8039749 3001705 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyMetallo-dependent hydrolases 8032391 3000428 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyMetallo-dependent hydrolases 8032391 3000428 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyMetallo-dependent hydrolases 8032391 3000428 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyMetallo-dependent hydrolases 8032391 3000428 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DCaudo_bapla_RBP_necke2bgnD1 A: alpha bundlesX: Cloacin translocation domainH: Cloacin translocation domainT: Cloacin translocation domainF: Caudo_bapla_RBP_neckECOD (develop294)
DAbhydrolase_1e2bgnD2 A: alpha bundlesX: HTHH: HTHT: winged helix domainF: Abhydrolase_1ECOD (develop294)
CCaudo_bapla_RBP_necke2bgnC1 A: alpha bundlesX: Cloacin translocation domainH: Cloacin translocation domainT: Cloacin translocation domainF: Caudo_bapla_RBP_neckECOD (develop294)
CAbhydrolase_1e2bgnC2 A: alpha bundlesX: HTHH: HTHT: winged helix domainF: Abhydrolase_1ECOD (develop294)
BCaudo_bapla_RBP_necke2bgnB1 A: alpha bundlesX: Cloacin translocation domainH: Cloacin translocation domainT: Cloacin translocation domainF: Caudo_bapla_RBP_neckECOD (develop294)
BAbhydrolase_1e2bgnB2 A: alpha bundlesX: HTHH: HTHT: winged helix domainF: Abhydrolase_1ECOD (develop294)
ACaudo_bapla_RBP_necke2bgnA1 A: alpha bundlesX: Cloacin translocation domainH: Cloacin translocation domainT: Cloacin translocation domainF: Caudo_bapla_RBP_neckECOD (develop294)
AAbhydrolase_1e2bgnA2 A: alpha bundlesX: HTHH: HTHT: winged helix domainF: Abhydrolase_1ECOD (develop294)
HDUF711e2bgnH1 A: alpha bundlesX: HTHH: HTHT: winged helix domainF: DUF711ECOD (develop294)
GDUF711e2bgnG1 A: alpha bundlesX: HTHH: HTHT: winged helix domainF: DUF711ECOD (develop294)
FDUF711e2bgnF1 A: alpha bundlesX: HTHH: HTHT: winged helix domainF: DUF711ECOD (develop294)
EDUF711e2bgnE1 A: alpha bundlesX: HTHH: HTHT: winged helix domainF: DUF711ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF00930Dipeptidyl peptidase IV (DPP IV) N-terminal region (DPPIV_N)Dipeptidyl peptidase IV (DPP IV) N-terminal region- Repeat
A, B, C, D
PF00326Prolyl oligopeptidase family (Peptidase_S9)Prolyl oligopeptidase familyDomain
E, F, G, H
PF00962Adenosine deaminase (A_deaminase)Adenosine deaminaseDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
DIPEPTIDYL PEPTIDASE IV
E, F, G, H
ADENOSINE DEAMINASE
I [auth W],
J [auth X],
K [auth Y],
L [auth Z]
TAT PROTEIN