3-D structure of Myosin-V inhibited state
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| H [auth M] | SCOP2B Superfamily | P-loop motor domain | 8032926 | 3002036 | SCOP2B (2022-06-29) |
| H [auth M] | SCOP2B Superfamily | Myosin s1 fragment, N-terminal domain | 8032925 | 3000319 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | P-loop motor domain | 8032926 | 3002036 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Myosin s1 fragment, N-terminal domain | 8032925 | 3000319 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| N [auth S] | EF-hand_1, EF-hand_7 | e2dfsS1 | A: alpha bundles | X: UBC-like | H: UBC-like | T: Concanavalin A-like lectins/glucanases | F: EF-hand_1, EF-hand_7 | ECOD (develop294) |
| N [auth S] | Lyase_aromatic | e2dfsS2 | A: alpha bundles | X: UBC-like | H: UBC-like | T: Concanavalin A-like lectins/glucanases | F: Lyase_aromatic | ECOD (develop294) |
| M [auth R] | EF-hand_1, EF-hand_7 | e2dfsR1 | A: alpha bundles | X: UBC-like | H: UBC-like | T: Concanavalin A-like lectins/glucanases | F: EF-hand_1, EF-hand_7 | ECOD (develop294) |
| M [auth R] | EF-hand_1 | e2dfsR3 | A: alpha bundles | X: Glutamine synthetase-like | H: Glutamine synthetase/guanido kinase | T: Glutamine synthetase/guanido kinase | F: EF-hand_1 | ECOD (develop294) |
| L [auth Q] | EF-hand_1, EF-hand_7 | e2dfsQ1 | A: alpha bundles | X: UBC-like | H: UBC-like | T: Concanavalin A-like lectins/glucanases | F: EF-hand_1, EF-hand_7 | ECOD (develop294) |
| L [auth Q] | EF-hand_1 | e2dfsQ3 | A: alpha bundles | X: Subtilisin-like | H: Subtilisin-like | T: Subtilisin-like | F: EF-hand_1 | ECOD (develop294) |
| K [auth P] | EF-hand_1, EF-hand_7 | e2dfsP1 | A: alpha bundles | X: UBC-like | H: UBC-like | T: Concanavalin A-like lectins/glucanases | F: EF-hand_1, EF-hand_7 | ECOD (develop294) |
| K [auth P] | EF-hand_1 | e2dfsP3 | A: alpha bundles | X: Glutamine synthetase-like | H: Glutamine synthetase/guanido kinase | T: Glutamine synthetase/guanido kinase | F: EF-hand_1 | ECOD (develop294) |
| J [auth O] | EF-hand_1, EF-hand_7 | e2dfsO1 | A: alpha bundles | X: UBC-like | H: UBC-like | T: Concanavalin A-like lectins/glucanases | F: EF-hand_1, EF-hand_7 | ECOD (develop294) |
| J [auth O] | Lyase_aromatic | e2dfsO2 | A: alpha bundles | X: UBC-like | H: UBC-like | T: Concanavalin A-like lectins/glucanases | F: Lyase_aromatic | ECOD (develop294) |
| I [auth N] | EF-hand_1, EF-hand_7 | e2dfsN1 | A: alpha bundles | X: UBC-like | H: UBC-like | T: Concanavalin A-like lectins/glucanases | F: EF-hand_1, EF-hand_7 | ECOD (develop294) |
| I [auth N] | EF-hand_1 | e2dfsN3 | A: alpha bundles | X: Glutamine synthetase-like | H: Glutamine synthetase/guanido kinase | T: Glutamine synthetase/guanido kinase | F: EF-hand_1 | ECOD (develop294) |
| G | EF-hand_1, EF-hand_7 | e2dfsG1 | A: alpha bundles | X: UBC-like | H: UBC-like | T: Concanavalin A-like lectins/glucanases | F: EF-hand_1, EF-hand_7 | ECOD (develop294) |
| G | Lyase_aromatic | e2dfsG2 | A: alpha bundles | X: UBC-like | H: UBC-like | T: Concanavalin A-like lectins/glucanases | F: Lyase_aromatic | ECOD (develop294) |
| F | EF-hand_1, EF-hand_7 | e2dfsF1 | A: alpha bundles | X: UBC-like | H: UBC-like | T: Concanavalin A-like lectins/glucanases | F: EF-hand_1, EF-hand_7 | ECOD (develop294) |
| F | EF-hand_1 | e2dfsF3 | A: alpha bundles | X: Glutamine synthetase-like | H: Glutamine synthetase/guanido kinase | T: Glutamine synthetase/guanido kinase | F: EF-hand_1 | ECOD (develop294) |
| E | EF-hand_1, EF-hand_7 | e2dfsE1 | A: alpha bundles | X: UBC-like | H: UBC-like | T: Concanavalin A-like lectins/glucanases | F: EF-hand_1, EF-hand_7 | ECOD (develop294) |
| E | EF-hand_1 | e2dfsE3 | A: alpha bundles | X: Subtilisin-like | H: Subtilisin-like | T: Subtilisin-like | F: EF-hand_1 | ECOD (develop294) |
| D | EF-hand_1, EF-hand_7 | e2dfsD1 | A: alpha bundles | X: UBC-like | H: UBC-like | T: Concanavalin A-like lectins/glucanases | F: EF-hand_1, EF-hand_7 | ECOD (develop294) |
| D | EF-hand_1 | e2dfsD3 | A: alpha bundles | X: Glutamine synthetase-like | H: Glutamine synthetase/guanido kinase | T: Glutamine synthetase/guanido kinase | F: EF-hand_1 | ECOD (develop294) |
| C | EF-hand_1, EF-hand_7 | e2dfsC1 | A: alpha bundles | X: UBC-like | H: UBC-like | T: Concanavalin A-like lectins/glucanases | F: EF-hand_1, EF-hand_7 | ECOD (develop294) |
| C | Lyase_aromatic | e2dfsC2 | A: alpha bundles | X: UBC-like | H: UBC-like | T: Concanavalin A-like lectins/glucanases | F: Lyase_aromatic | ECOD (develop294) |
| B | EF-hand_1, EF-hand_7 | e2dfsB1 | A: alpha bundles | X: UBC-like | H: UBC-like | T: Concanavalin A-like lectins/glucanases | F: EF-hand_1, EF-hand_7 | ECOD (develop294) |
| B | EF-hand_1 | e2dfsB3 | A: alpha bundles | X: Glutamine synthetase-like | H: Glutamine synthetase/guanido kinase | T: Glutamine synthetase/guanido kinase | F: EF-hand_1 | ECOD (develop294) |
| H [auth M] | Ribosomal_S6e | e2dfsM1 | A: alpha bundles | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Ribosomal_S6e | ECOD (develop294) |
| H [auth M] | e2dfsM3 | A: alpha bundles | X: Anticodon-binding domain of Class II aaRS | H: Anticodon-binding domain of Class II aaRS | T: Anticodon-binding domain of Class II aaRS | F: | ECOD (develop294) | |
| A | Dockerin_1 | e2dfsA1 | A: alpha bundles | X: Ribonuclease H-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: Dockerin_1 | ECOD (develop294) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF13499 | EF-hand domain pair (EF-hand_7) | EF-hand domain pair | Domain | ||
| A, H [auth M] | PF00612 | IQ calmodulin-binding motif (IQ) | IQ calmodulin-binding motif | - | Motif |
| A, H [auth M] | PF00063 | Myosin head (motor domain) (Myosin_head) | Myosin head (motor domain) | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR002048 | EF-hand domain | Domain | |
| IPR050230 | Calmodulin/Myosin light chain/Troponin C-like | Family | |
| IPR018247 | EF-Hand 1, calcium-binding site | Binding Site | |
| IPR011992 | EF-hand domain pair | Homologous Superfamily | |
| A, H [auth M] | IPR036961 | Kinesin motor domain superfamily | Homologous Superfamily |
| A, H [auth M] | IPR001609 | Myosin head, motor domain-like | Domain |
| A, H [auth M] | IPR002710 | Dilute domain | Domain |
| A, H [auth M] | IPR000048 | IQ motif, EF-hand binding site | Binding Site |
| A, H [auth M] | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |
| A, H [auth M] | IPR004009 | Myosin, SH3 domain | Domain |
| A, H [auth M] | IPR036103 | Class V myosin, motor domain | Domain |
| A, H [auth M] | IPR037988 | Myosin 5a, cargo-binding domain | Domain |
| A, H [auth M] | IPR058662 | Unconventional myosin-Va/b domain | Domain |














