2DFS | pdb_00002dfs

3-D structure of Myosin-V inhibited state


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
N [auth S]d2dfss1 All alpha proteins EF Hand-like EF-hand Calmodulin-like Calmodulin house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
M [auth R]d2dfsr1 All alpha proteins EF Hand-like EF-hand Calmodulin-like Calmodulin house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
L [auth Q]d2dfsq1 All alpha proteins EF Hand-like EF-hand Calmodulin-like Calmodulin house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
K [auth P]d2dfsp1 All alpha proteins EF Hand-like EF-hand Calmodulin-like Calmodulin house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
J [auth O]d2dfso1 All alpha proteins EF Hand-like EF-hand Calmodulin-like Calmodulin house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
I [auth N]d2dfsn1 All alpha proteins EF Hand-like EF-hand Calmodulin-like Calmodulin house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Gd2dfsg1 All alpha proteins EF Hand-like EF-hand Calmodulin-like Calmodulin house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Fd2dfsf1 All alpha proteins EF Hand-like EF-hand Calmodulin-like Calmodulin house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ed2dfse1 All alpha proteins EF Hand-like EF-hand Calmodulin-like Calmodulin house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Dd2dfsd1 All alpha proteins EF Hand-like EF-hand Calmodulin-like Calmodulin house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Cd2dfsc1 All alpha proteins EF Hand-like EF-hand Calmodulin-like Calmodulin house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Bd2dfsb1 All alpha proteins EF Hand-like EF-hand Calmodulin-like Calmodulin house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
H [auth M]SCOP2B SuperfamilyP-loop motor domain 8032926 3002036 SCOP2B (2022-06-29)
H [auth M]SCOP2B SuperfamilyMyosin s1 fragment, N-terminal domain 8032925 3000319 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyP-loop motor domain 8032926 3002036 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyMyosin s1 fragment, N-terminal domain 8032925 3000319 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
N [auth S]EF-hand_1, EF-hand_7e2dfsS1 A: alpha bundlesX: UBC-likeH: UBC-likeT: Concanavalin A-like lectins/glucanasesF: EF-hand_1, EF-hand_7ECOD (develop294)
N [auth S]Lyase_aromatice2dfsS2 A: alpha bundlesX: UBC-likeH: UBC-likeT: Concanavalin A-like lectins/glucanasesF: Lyase_aromaticECOD (develop294)
M [auth R]EF-hand_1, EF-hand_7e2dfsR1 A: alpha bundlesX: UBC-likeH: UBC-likeT: Concanavalin A-like lectins/glucanasesF: EF-hand_1, EF-hand_7ECOD (develop294)
M [auth R]EF-hand_1e2dfsR3 A: alpha bundlesX: Glutamine synthetase-likeH: Glutamine synthetase/guanido kinaseT: Glutamine synthetase/guanido kinaseF: EF-hand_1ECOD (develop294)
L [auth Q]EF-hand_1, EF-hand_7e2dfsQ1 A: alpha bundlesX: UBC-likeH: UBC-likeT: Concanavalin A-like lectins/glucanasesF: EF-hand_1, EF-hand_7ECOD (develop294)
L [auth Q]EF-hand_1e2dfsQ3 A: alpha bundlesX: Subtilisin-likeH: Subtilisin-likeT: Subtilisin-likeF: EF-hand_1ECOD (develop294)
K [auth P]EF-hand_1, EF-hand_7e2dfsP1 A: alpha bundlesX: UBC-likeH: UBC-likeT: Concanavalin A-like lectins/glucanasesF: EF-hand_1, EF-hand_7ECOD (develop294)
K [auth P]EF-hand_1e2dfsP3 A: alpha bundlesX: Glutamine synthetase-likeH: Glutamine synthetase/guanido kinaseT: Glutamine synthetase/guanido kinaseF: EF-hand_1ECOD (develop294)
J [auth O]EF-hand_1, EF-hand_7e2dfsO1 A: alpha bundlesX: UBC-likeH: UBC-likeT: Concanavalin A-like lectins/glucanasesF: EF-hand_1, EF-hand_7ECOD (develop294)
J [auth O]Lyase_aromatice2dfsO2 A: alpha bundlesX: UBC-likeH: UBC-likeT: Concanavalin A-like lectins/glucanasesF: Lyase_aromaticECOD (develop294)
I [auth N]EF-hand_1, EF-hand_7e2dfsN1 A: alpha bundlesX: UBC-likeH: UBC-likeT: Concanavalin A-like lectins/glucanasesF: EF-hand_1, EF-hand_7ECOD (develop294)
I [auth N]EF-hand_1e2dfsN3 A: alpha bundlesX: Glutamine synthetase-likeH: Glutamine synthetase/guanido kinaseT: Glutamine synthetase/guanido kinaseF: EF-hand_1ECOD (develop294)
GEF-hand_1, EF-hand_7e2dfsG1 A: alpha bundlesX: UBC-likeH: UBC-likeT: Concanavalin A-like lectins/glucanasesF: EF-hand_1, EF-hand_7ECOD (develop294)
GLyase_aromatice2dfsG2 A: alpha bundlesX: UBC-likeH: UBC-likeT: Concanavalin A-like lectins/glucanasesF: Lyase_aromaticECOD (develop294)
FEF-hand_1, EF-hand_7e2dfsF1 A: alpha bundlesX: UBC-likeH: UBC-likeT: Concanavalin A-like lectins/glucanasesF: EF-hand_1, EF-hand_7ECOD (develop294)
FEF-hand_1e2dfsF3 A: alpha bundlesX: Glutamine synthetase-likeH: Glutamine synthetase/guanido kinaseT: Glutamine synthetase/guanido kinaseF: EF-hand_1ECOD (develop294)
EEF-hand_1, EF-hand_7e2dfsE1 A: alpha bundlesX: UBC-likeH: UBC-likeT: Concanavalin A-like lectins/glucanasesF: EF-hand_1, EF-hand_7ECOD (develop294)
EEF-hand_1e2dfsE3 A: alpha bundlesX: Subtilisin-likeH: Subtilisin-likeT: Subtilisin-likeF: EF-hand_1ECOD (develop294)
DEF-hand_1, EF-hand_7e2dfsD1 A: alpha bundlesX: UBC-likeH: UBC-likeT: Concanavalin A-like lectins/glucanasesF: EF-hand_1, EF-hand_7ECOD (develop294)
DEF-hand_1e2dfsD3 A: alpha bundlesX: Glutamine synthetase-likeH: Glutamine synthetase/guanido kinaseT: Glutamine synthetase/guanido kinaseF: EF-hand_1ECOD (develop294)
CEF-hand_1, EF-hand_7e2dfsC1 A: alpha bundlesX: UBC-likeH: UBC-likeT: Concanavalin A-like lectins/glucanasesF: EF-hand_1, EF-hand_7ECOD (develop294)
CLyase_aromatice2dfsC2 A: alpha bundlesX: UBC-likeH: UBC-likeT: Concanavalin A-like lectins/glucanasesF: Lyase_aromaticECOD (develop294)
BEF-hand_1, EF-hand_7e2dfsB1 A: alpha bundlesX: UBC-likeH: UBC-likeT: Concanavalin A-like lectins/glucanasesF: EF-hand_1, EF-hand_7ECOD (develop294)
BEF-hand_1e2dfsB3 A: alpha bundlesX: Glutamine synthetase-likeH: Glutamine synthetase/guanido kinaseT: Glutamine synthetase/guanido kinaseF: EF-hand_1ECOD (develop294)
H [auth M]Ribosomal_S6ee2dfsM1 A: alpha bundlesX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: Ribosomal_S6eECOD (develop294)
H [auth M]e2dfsM3 A: alpha bundlesX: Anticodon-binding domain of Class II aaRSH: Anticodon-binding domain of Class II aaRST: Anticodon-binding domain of Class II aaRSF:ECOD (develop294)
ADockerin_1e2dfsA1 A: alpha bundlesX: Ribonuclease H-likeH: Rossmann-relatedT: S-adenosyl-L-methionine-dependent methyltransferasesF: Dockerin_1ECOD (develop294)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B,
C,
D,
E,
F,
PF13499EF-hand domain pair (EF-hand_7)EF-hand domain pairDomain
A,
H [auth M]
PF00612IQ calmodulin-binding motif (IQ)IQ calmodulin-binding motif- Motif
A,
H [auth M]
PF00063Myosin head (motor domain) (Myosin_head)Myosin head (motor domain)Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B,
C,
D,
E,
F,
Calmodulin
A,
H [auth M]
Myosin-5A