2DLB
X-ray Crystal Structure of Protein yopT from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR412
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2dlba1 | All beta proteins | YopT-like | YopT-like | YopT-like | Uncharacterized protein YopT | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
B | d2dlbb_ | All beta proteins | YopT-like | YopT-like | YopT-like | automated matches | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | UNK_F_TYPE | e2dlbA1 | A: a+b duplicates or obligate multimers | X: YopT-like (From Topology) | H: YopT-like (From Topology) | T: YopT-like | F: UNK_F_TYPE | ECOD (1.6) |
B | UNK_F_TYPE | e2dlbB1 | A: a+b duplicates or obligate multimers | X: YopT-like (From Topology) | H: YopT-like (From Topology) | T: YopT-like | F: UNK_F_TYPE | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.20.330 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Protein of unknown function YopT | CATH (4.3.0) |
B | 3.10.20.330 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Protein of unknown function YopT | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09467 | Hypothetical protein Yopt (Yopt) | Hypothetical protein Yopt | This hypothetical protein is expressed in bacteria, particularly Bacillus subtilis. It forms homo-dimers, with each monomer consisting of one alpha helix and three beta strands. | Domain |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR038082 | YopT domain superfamily | Homologous Superfamily | |
IPR018572 | Protein of unknown function YopT | Family |