Structures of the noncovalent complexes of human and bovine prothrombin fragment 2 with human ppack-thrombin
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C [auth P] | d2hppp_ | Small proteins | Kringle-like | Kringle-like | Kringle modules | Meizothrombin | (Bos taurus ) [TaxId: 9913 ], | SCOPe (2.08) |
| B [auth H] | d2hpp.1 | All beta proteins | Trypsin-like serine proteases | Trypsin-like serine proteases | Eukaryotic proteases | Thrombin | (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
| A [auth L] | d2hpp.1 | All beta proteins | Trypsin-like serine proteases | Trypsin-like serine proteases | Eukaryotic proteases | Thrombin | (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| C [auth P] | SCOP2 Family | Kringle modules | 8026284 | 4003395 | SCOP2 (2022-06-29) |
| C [auth P] | SCOP2 Superfamily | Kringle-like | 8038663 | 3000761 | SCOP2 (2022-06-29) |
| B [auth H] | SCOP2B Superfamily | Trypsin-like serine proteases | 8042154 | 3000114 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C [auth P] | Toxin_2 | e2hppP1 | A: alpha arrays | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: Toxin_2 | ECOD (v295.2) |
| B [auth H] | Flu_M2 | e2hppH1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Flu_M2 | ECOD (v295.2) |
| A [auth L] | Flu_M2 | e2hppL1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Flu_M2 | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C [auth P] | 2.40.20.10 | Mainly Beta | Beta Barrel | Plasminogen Kringle 4 | Plasminogen Kringle 4 | CATH (4.3.0) |
| B [auth H] | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| C [auth P] | PF00051 | Kringle domain (Kringle) | Kringle domain | Kringle domains have been found in plasminogen, hepatocyte growth factors, prothrombin, and apolipoprotein A. Structure is disulfide-rich, nearly all-beta. | Domain |
| B [auth H] | PF00089 | Trypsin (Trypsin) | Trypsin | Domain | |














