2KH2
Solution structure of a scFv-IL-1B complex
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2kh2a_ | All beta proteins | beta-Trefoil | Cytokine | Interleukin-1 (IL-1) | Interleukin-1beta | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d2kh2b1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | automated matches | automated matches | mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
B | d2kh2b2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | IL1 | e2kh2A1 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: IL1 | ECOD (1.6) |
B | V-set | e2kh2B1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
B | V-set_10 | e2kh2B2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_10 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) | |
B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
scFv, anti-IL-1 beta | SCFV-KAPPA-HEAVY | Mus musculus (house mouse) | IGKV12-41*02, IGKV12-41*01, IGKJ4*01, IGHV5-12-1*01, IGHJ4*01 | V-DOMAIN V-KAPPA, V-DOMAIN VH | IG | SCFV-KAPPA-HEAVY | IMGT (202442-0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00340 | Interleukin-1 / 18 (IL1) | Interleukin-1 / 18 | This family includes interleukin-1 and interleukin-18. | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR020877 | Interleukin-1 conserved site | Conserved Site | |
IPR008996 | Cytokine IL1/FGF | Homologous Superfamily | |
IPR000975 | Interleukin-1 family | Family | |
IPR003502 | Interleukin-1 propeptide | Domain |