Crystal structure of hypothetical protein aq_2013 from Aquifex aeolicus VF5.


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd2p6cb_ Alpha and beta proteins (a+b) YjbQ-like YjbQ-like YjbQ-like automated matches (Aquifex aeolicus VF5 ) [TaxId: 224324 ], SCOPe (2.08)
Ad2p6ca_ Alpha and beta proteins (a+b) YjbQ-like YjbQ-like YjbQ-like automated matches (Aquifex aeolicus VF5 ) [TaxId: 224324 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyYjbQ-like 8088250 3001472 SCOP2B (2022-06-29)
ASCOP2 FamilyYjbQ-like 8088249 4002602 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyYjbQ-like 8088250 3001472 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPK_Tyr_Ser-Thre2p6cB1 A: beta barrelsX: HTHH: NudixT: NudixF: PK_Tyr_Ser-ThrECOD (v294.2)
AHydrolasee2p6cA1 A: beta barrelsX: Profilin-likeH: sensor domainsT: sensor domainsF: HydrolaseECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.120.460 Mainly Beta Sandwich Jelly Rolls YjbQ-likeCATH (4.3.0)
A2.60.120.460 Mainly Beta Sandwich Jelly Rolls YjbQ-likeCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF01894UPF0047 protein YjbQ-like (YjbQ)UPF0047 protein YjbQ-likeThis family includes YjbQ from Escherichia coli, its orthologue from Pyrococcus furiosus and similar sequences. These proteins have been shown to have sufficient thiamine phosphate synthase activity to complement thiE mutants. However, it is presumed ...This family includes YjbQ from Escherichia coli, its orthologue from Pyrococcus furiosus and similar sequences. These proteins have been shown to have sufficient thiamine phosphate synthase activity to complement thiE mutants. However, it is presumed that this is a secondary activity, and the primary function of the YjbQ family enzyme remains unknown [1, 2].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR035917YjbQ-like superfamilyHomologous Superfamily
A, B
IPR001602UPF0047 protein YjbQ-likeFamily