2PA7 | pdb_00002pa7

Structure of Wild-Type dTDP-4-keto-6-deoxy-D-glucose-3,4-ketoisomerase from Aneurinibacillus thermoaerophilus in complex with TDP

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d2pa7b_	All beta proteins	Double-stranded beta-helix	RmlC-like cupins	dTDP-sugar isomerase	dTDP-6-deoxy-3,4-keto-hexulose isomerase FdtA	(Aneurinibacillus thermoaerophilus ) [TaxId: 143495 ],	SCOPe (2.08)
A	d2pa7a1	All beta proteins	Double-stranded beta-helix	RmlC-like cupins	dTDP-sugar isomerase	dTDP-6-deoxy-3,4-keto-hexulose isomerase FdtA	(Aneurinibacillus thermoaerophilus ) [TaxId: 143495 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	RmlC-like cupins	8035492	3001825	SCOP2B (2022-06-29)
A	SCOP2 Family	dTDP-sugar isomerase	8023112	4002863	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	RmlC-like cupins	8035492	3001825	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	GPI	e2pa7B1	A: a/b three-layered sandwiches	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: GPI	ECOD (v294.1)
A	FdtA	e2pa7A1	A: beta sandwiches	X: jelly-roll	H: Double-stranded beta-helix	T: Double-stranded beta-helix	F: FdtA	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.60.120.10	Mainly Beta	Sandwich	Jelly Rolls	Jelly Rolls	CATH (4.3.0)
A	2.60.120.10	Mainly Beta	Sandwich	Jelly Rolls	Jelly Rolls	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	DTDP-6-deoxy-3,4-keto-hexulose isomerase	isomerase activity catalytic activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR008894	Sugar 3,4-ketoisomerase QdtA, cupin domain	Domain
A, B	IPR011051	RmlC-like cupin domain superfamily	Homologous Superfamily
A, B	IPR014710	RmlC-like jelly roll fold	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.