Annotations: 2RU7

Refined structure of RNA aptamer in complex with the partial binding peptide of prion protein

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C, D	P16 peptide from Major prion protein	G-quadruplex RNA binding RNA binding binding nucleic acid binding molecular condensate scaffold activity protein-macromolecule adaptor activity molecular adaptor activity cation binding transition metal ion binding copper ion binding ion binding metal ion binding small molecule binding identical protein binding G-quadruplex RNA binding RNA binding binding nucleic acid binding molecular condensate scaffold activity protein-macromolecule adaptor activity molecular adaptor activity cation binding transition metal ion binding copper ion binding ion binding metal ion binding small molecule binding identical protein binding protein binding	cellular response to stimulus response to copper ion cellular response to metal ion cellular response to chemical stimulus response to stimulus response to metal ion response to chemical cellular process cellular response to copper ion positive regulation of cell communication regulation of cellular process positive regulation of signal transduction signaling positive regulation of biological process cellular response to stimulus response to copper ion cellular response to metal ion cellular response to chemical stimulus response to stimulus response to metal ion response to chemical cellular process cellular response to copper ion positive regulation of cell communication regulation of cellular process positive regulation of signal transduction signaling positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction intracellular signaling cassette regulation of calcium-mediated signaling positive regulation of calcium-mediated signaling signal transduction positive regulation of cellular process regulation of biological process regulation of signaling biological regulation positive regulation of intracellular signal transduction regulation of response to stimulus calcium-mediated signaling regulation of cell communication positive regulation of signaling cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein complex oligomerization protein-containing complex assembly protein homooligomerization cellular component organization or biogenesis cell surface receptor signaling pathway glutamate receptor signaling pathway regulation of glutamate receptor signaling pathway	cellular anatomical structure membrane side of membrane membrane-bounded organelle intracellular organelle intracellular anatomical structure Golgi apparatus organelle cytoplasm intracellular membrane-bounded organelle endomembrane system cell periphery plasma membrane membrane microdomain cellular anatomical structure membrane side of membrane membrane-bounded organelle intracellular organelle intracellular anatomical structure Golgi apparatus organelle cytoplasm intracellular membrane-bounded organelle endomembrane system cell periphery plasma membrane membrane microdomain membrane raft
A, B	RNA_(5'-R(GPGPAPGPGPAPGPGPAPGPGPA)-3')	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C, D	IPR020949	Prion, copper binding octapeptide repeat region	Repeat
C, D	IPR036924	Prion/Doppel beta-ribbon domain superfamily	Homologous Superfamily
C, D	IPR000817	Prion protein	Family
C, D	IPR025860	Major prion protein N-terminal	Domain
C, D	IPR022416	Prion/Doppel protein, beta-ribbon domain	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

2RU7 | pdb_00002ru7

Refined structure of RNA aptamer in complex with the partial binding peptide of prion protein

External Resource: Annotation

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage