2X0H
BtGH84 Michaelis complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | beta-N-acetylhexosaminidase-like domain | 8037815 | 3000192 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Hyaluronidase post-catalytic domain-like | 8037810 | 3001475 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | (Trans)glycosidases | 8037813 | 3000313 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | (Trans)glycosidases | 8037813 | 3000313 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Hyaluronidase post-catalytic domain-like | 8037810 | 3001475 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | beta-N-acetylhexosaminidase-like domain | 8037815 | 3000192 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F5_F8_type_C_like_1 | e2x0hA4 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Galactose-binding domain-like | F: F5_F8_type_C_like_1 | ECOD (1.6) |
A | Glyco_hydro_84_helical | e2x0hA3 | A: alpha bundles | X: Hyaluronidase domain-like | H: Hyaluronidase post-catalytic domain-like (From Topology) | T: Hyaluronidase post-catalytic domain-like | F: Glyco_hydro_84_helical | ECOD (1.6) |
A | NAGidase | e2x0hA5 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: NAGidase | ECOD (1.6) |
A | Glyco_hydro_20b | e2x0hA6 | A: mixed a+b and a/b | X: Zincin-like | H: beta-N-acetylhexosaminidase-like domain (From Topology) | T: beta-N-acetylhexosaminidase-like domain | F: Glyco_hydro_20b | ECOD (1.6) |
B | F5_F8_type_C_like_1 | e2x0hB4 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Galactose-binding domain-like | F: F5_F8_type_C_like_1 | ECOD (1.6) |
B | Glyco_hydro_84_helical | e2x0hB3 | A: alpha bundles | X: Hyaluronidase domain-like | H: Hyaluronidase post-catalytic domain-like (From Topology) | T: Hyaluronidase post-catalytic domain-like | F: Glyco_hydro_84_helical | ECOD (1.6) |
B | NAGidase | e2x0hB5 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: NAGidase | ECOD (1.6) |
B | Glyco_hydro_20b | e2x0hB6 | A: mixed a+b and a/b | X: Zincin-like | H: beta-N-acetylhexosaminidase-like domain (From Topology) | T: beta-N-acetylhexosaminidase-like domain | F: Glyco_hydro_20b | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.379.10 | Alpha Beta | 2-Layer Sandwich | Chitobiase | domain 2 | CATH (4.3.0) |
A | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
A | 1.20.58.460 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
B | 3.30.379.10 | Alpha Beta | 2-Layer Sandwich | Chitobiase | domain 2 | CATH (4.3.0) |
B | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
B | 1.20.58.460 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21809 | Bacterial GH84, post-catalytic domain (Glyco_hydro_84_hel) | Bacterial GH84, post-catalytic domain | This is a helical domain found after the catalytic domain of enzymes from the Glycoside hydrolase family 84 from Bacteroides spp. and certain pathogenic Clostridia spp [1-5]. | Domain | |
PF18344 | Carbohydrate binding module family 32 (CBM32) | Carbohydrate binding module family 32 | This domain is found in GH84C present in Clostridium perfringens. GH84C is a beta-N-acetylglucosaminidase. This domain is a family 32 carbohydrate binding module (CBM) which preferentially recognizes the non-reducing terminus of N-acetyllactosamine [ ... | Domain | |
PF07555 | beta-N-acetylglucosaminidase (NAGidase) | beta-N-acetylglucosaminidase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR051822 | Glycosyl Hydrolase Family 84 | Family | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR029018 | Beta-hexosaminidase-like, domain 2 | Homologous Superfamily | |
IPR049478 | O-GlcNAcase BT_4395-like, post-catalytic domain | Domain | |
IPR011496 | Beta-N-acetylglucosaminidase, catalytic domain | Domain | |
IPR048162 | O-GlcNAcase BT_4395-like | Family | |
IPR013780 | Glycosyl hydrolase, all-beta | Homologous Superfamily | |
IPR015882 | Beta-hexosaminidase, bacterial type, N-terminal | Domain |