2X5S
Crystal structure of T. maritima GDP-mannose pyrophosphorylase in apo state.
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | MannoseP_isomer | e2x5sA1 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain (From Topology) | T: Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain | F: MannoseP_isomer | ECOD (1.6) |
A | NTP_transferase | e2x5sA2 | A: a/b three-layered sandwiches | X: Nucleotide-diphospho-sugar transferases (From Topology) | H: Nucleotide-diphospho-sugar transferases (From Topology) | T: Nucleotide-diphospho-sugar transferases | F: NTP_transferase | ECOD (1.6) |
B | MannoseP_isomer | e2x5sB1 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain (From Topology) | T: Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain | F: MannoseP_isomer | ECOD (1.6) |
B | NTP_transferase | e2x5sB2 | A: a/b three-layered sandwiches | X: Nucleotide-diphospho-sugar transferases (From Topology) | H: Nucleotide-diphospho-sugar transferases (From Topology) | T: Nucleotide-diphospho-sugar transferases | F: NTP_transferase | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.90.550.10 | Alpha Beta | Alpha-Beta Complex | Spore Coat Polysaccharide Biosynthesis Protein SpsA | Chain A | CATH (4.3.0) |
B | 3.90.550.10 | Alpha Beta | Alpha-Beta Complex | Spore Coat Polysaccharide Biosynthesis Protein SpsA | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF22640 | MannoseP isomerase/GMP-like beta-helix domain (ManC_GMP_beta-helix) | MannoseP isomerase/GMP-like beta-helix domain | This entry represents a left-handed beta-helix domain found at the C-terminal of Guanosine-diphospho-d-mannose Pyrophosphorylase (GMP) from Thermotoga maritima [1] and as a linker domain in mannose-1-phosphate guanylyltransferases, alginate biosynthe ... | Domain | |
PF00483 | Nucleotidyl transferase (NTP_transferase) | Nucleotidyl transferase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR049577 | GDP-mannose pyrophosphorylase, N-terminal domain | Domain | |
IPR005835 | Nucleotidyl transferase domain | Domain | |
IPR029044 | Nucleotide-diphospho-sugar transferases | Homologous Superfamily | |
IPR051161 | Mannose-6-phosphate isomerase type 2 | Family |