2GTA
Crystal Structure of the putative pyrophosphatase YPJD from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR428.
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2gtaa1 | All alpha proteins | all-alpha NTP pyrophosphatases | all-alpha NTP pyrophosphatases | MazG-like | Hypothetical protein YpjD | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
B | d2gtab1 | All alpha proteins | all-alpha NTP pyrophosphatases | all-alpha NTP pyrophosphatases | MazG-like | Hypothetical protein YpjD | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
C | d2gtac1 | All alpha proteins | all-alpha NTP pyrophosphatases | all-alpha NTP pyrophosphatases | MazG-like | Hypothetical protein YpjD | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
D | d2gtad1 | All alpha proteins | all-alpha NTP pyrophosphatases | all-alpha NTP pyrophosphatases | MazG-like | Hypothetical protein YpjD | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
D | d2gtad2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | MazG-like | 8029664 | 4003078 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | all-alpha NTP pyrophosphatases | 8042043 | 3001174 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | all-alpha NTP pyrophosphatases | 8042043 | 3001174 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | all-alpha NTP pyrophosphatases | 8042043 | 3001174 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | all-alpha NTP pyrophosphatases | 8042043 | 3001174 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | MazG_1 | e2gtaA1 | A: alpha bundles | X: all-alpha NTP pyrophosphatases (From Homology) | H: all-alpha NTP pyrophosphatases | T: MazG-related | F: MazG_1 | ECOD (1.6) |
B | MazG_1 | e2gtaB2 | A: alpha bundles | X: all-alpha NTP pyrophosphatases (From Homology) | H: all-alpha NTP pyrophosphatases | T: MazG-related | F: MazG_1 | ECOD (1.6) |
C | MazG_1 | e2gtaC2 | A: alpha bundles | X: all-alpha NTP pyrophosphatases (From Homology) | H: all-alpha NTP pyrophosphatases | T: MazG-related | F: MazG_1 | ECOD (1.6) |
D | MazG_1 | e2gtaD1 | A: alpha bundles | X: all-alpha NTP pyrophosphatases (From Homology) | H: all-alpha NTP pyrophosphatases | T: MazG-related | F: MazG_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.287.1080 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | MazG-like | CATH (4.3.0) |
B | 1.10.287.1080 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | MazG-like | CATH (4.3.0) |
C | 1.10.287.1080 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | MazG-like | CATH (4.3.0) |
D | 1.10.287.1080 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | MazG-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03819 | MazG nucleotide pyrophosphohydrolase domain (MazG) | MazG nucleotide pyrophosphohydrolase domain | This domain is about 100 amino acid residues in length. It is found in the MazG protein from E. coli. It contains four conserved negatively charged residues that probably form an active site or metal binding site. This domain is found in isolation in ... | Domain |