2IFG
Structure of the extracellular segment of human TRKA in complex with nerve growth factor
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8055582 | 3000071 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | L domain-like | 8042717 | 3001010 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054811 | 3000071 | SCOP2B (2022-06-29) |
A | SCOP2 Family | Ngr ectodomain-like | 8030338 | 4002278 | SCOP2 (2022-06-29) |
A | SCOP2 Family | I set domains | 8054810 | 4007543 | SCOP2 (2022-06-29) |
A | SCOP2 Family | I set domains | 8055581 | 4007543 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | L domain-like | 8042717 | 3001010 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Immunoglobulin (Ig) domain-like | 8054811 | 3000071 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Immunoglobulin (Ig) domain-like | 8055582 | 3000071 | SCOP2 (2022-06-29) |
C [auth E] | SCOP2B Superfamily | Cystine-knot cytokines | 8038796 | 3000846 | SCOP2B (2022-06-29) |
D [auth F] | SCOP2B Superfamily | Cystine-knot cytokines | 8038796 | 3000846 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | I-set_10 | e2ifgB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: I-set_10 | ECOD (1.6) |
B | I-set_11 | e2ifgB4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: I-set_11 | ECOD (1.6) |
B | LRR_8_1 | e2ifgB2 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: LRR_8_1 | ECOD (1.6) |
A | I-set_10 | e2ifgA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: I-set_10 | ECOD (1.6) |
A | I-set_11 | e2ifgA4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: I-set_11 | ECOD (1.6) |
A | LRR_8_1 | e2ifgA2 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: LRR_8_1 | ECOD (1.6) |
C [auth E] | NGF | e2ifgE1 | A: few secondary structure elements | X: Cystine-knot cytokines (From Topology) | H: Cystine-knot cytokines (From Topology) | T: Cystine-knot cytokines | F: NGF | ECOD (1.6) |
D [auth F] | NGF | e2ifgF1 | A: few secondary structure elements | X: Cystine-knot cytokines (From Topology) | H: Cystine-knot cytokines (From Topology) | T: Cystine-knot cytokines | F: NGF | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.80.10.10 | Alpha Beta | Alpha-Beta Horseshoe | Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) | Ribonuclease Inhibitor | CATH (4.3.0) |
B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
A | 3.80.10.10 | Alpha Beta | Alpha-Beta Horseshoe | Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) | Ribonuclease Inhibitor | CATH (4.3.0) |
A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
C [auth E] | 2.10.90.10 | Mainly Beta | Ribbon | Cystine Knot Cytokines, subunit B | Cystine-knot cytokines | CATH (4.3.0) |
D [auth F] | 2.10.90.10 | Mainly Beta | Ribbon | Cystine Knot Cytokines, subunit B | Cystine-knot cytokines | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16920 | Leucine rich repeat C-terminal motif (LRRCT_2) | Leucine rich repeat C-terminal motif | - | Motif | |
C [auth E], D [auth F] | PF00243 | Nerve growth factor family (NGF) | Nerve growth factor family | - | Domain |