Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd3a5zb1 All beta proteins SH3-like barrel Translation proteins SH3-like domain automated matches automated matches (Escherichia coli ) [TaxId: 562 ], SCOPe (2.08)
Bd3a5zb2 All beta proteins OB-fold Nucleic acid-binding proteins automated matches automated matches (Escherichia coli ) [TaxId: 562 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyClass II aaRS and biotin synthetases 8098374 3000058 SCOP2B (2022-06-29)
CSCOP2 FamilyClass II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain 8098373 4001782 SCOP2 (2022-06-29)
CSCOP2 SuperfamilyClass II aaRS and biotin synthetases 8098374 3000058 SCOP2 (2022-06-29)
GSCOP2B SuperfamilyClass II aaRS and biotin synthetases 8098374 3000058 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyClass II aaRS and biotin synthetases 8098374 3000058 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AtRNA-synt_2e3a5zA1 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)
CtRNA-synt_2e3a5zC1 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)
GtRNA-synt_2e3a5zG1 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)
EtRNA-synt_2e3a5zE1 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)
BEFPe3a5zB1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: EFPECOD (1.6)
BEFP_Ne3a5zB2 A: beta barrelsX: SH3H: SH3T: SH3F: EFP_NECOD (1.6)
FEFP_Ne3a5zF1 A: beta barrelsX: SH3H: SH3T: SH3F: EFP_NECOD (1.6)
HEFPe3a5zH1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: EFPECOD (1.6)
HElong-fact-P_Ce3a5zH2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Elong-fact-P_CECOD (1.6)
HEFP_Ne3a5zH3 A: beta barrelsX: SH3H: SH3T: SH3F: EFP_NECOD (1.6)
DEFPe3a5zD1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: EFPECOD (1.6)
DElong-fact-P_Ce3a5zD2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Elong-fact-P_CECOD (1.6)
DEFP_Ne3a5zD3 A: beta barrelsX: SH3H: SH3T: SH3F: EFP_NECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C, E, G
PF00152tRNA synthetases class II (D, K and N) (tRNA-synt_2)tRNA synthetases class II (D, K and N)- Domain
B, D, F, H
PF09285Elongation factor P, C-terminal (Elong-fact-P_C)Elongation factor P, C-terminalMembers of this family of nucleic acid binding domains are predominantly found in elongation factor P, where they adopt an OB-fold, with five beta-strands forming a beta-barrel in a Greek-key topology [1].Domain
B, D, F, H
PF01132Elongation factor P (EF-P) OB domain (EFP)Elongation factor P (EF-P) OB domain- Domain
B, D, F, H
PF08207Elongation factor P (EF-P) KOW-like domain (EFP_N)Elongation factor P (EF-P) KOW-like domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C, E, G
Putative lysyl-tRNA synthetase
B, D, F, H
Elongation factor P