3B8O | pdb_00003b8o

Structure of WzzE- Bacterial Polysaccharide Co-polymerase

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d3b8oa1	Alpha and beta proteins (a+b)	Ferredoxin-like	Bacterial polysaccharide co-polymerase-like	FepE-like	Lipopolysaccharide biosynthesis protein WzzE	(Escherichia coli O157:H7 ) [TaxId: 83334 ],	SCOPe (2.08)
B	d3b8ob_	Alpha and beta proteins (a+b)	Ferredoxin-like	Bacterial polysaccharide co-polymerase-like	FepE-like	Lipopolysaccharide biosynthesis protein WzzE	(Escherichia coli O157:H7 ) [TaxId: 83334 ],	SCOPe (2.08)
C	d3b8oc_	Alpha and beta proteins (a+b)	Ferredoxin-like	Bacterial polysaccharide co-polymerase-like	FepE-like	Lipopolysaccharide biosynthesis protein WzzE	(Escherichia coli O157:H7 ) [TaxId: 83334 ],	SCOPe (2.08)
D	d3b8od_	Alpha and beta proteins (a+b)	Ferredoxin-like	Bacterial polysaccharide co-polymerase-like	FepE-like	Lipopolysaccharide biosynthesis protein WzzE	(Escherichia coli O157:H7 ) [TaxId: 83334 ],	SCOPe (2.08)
E	d3b8oe_	Alpha and beta proteins (a+b)	Ferredoxin-like	Bacterial polysaccharide co-polymerase-like	FepE-like	Lipopolysaccharide biosynthesis protein WzzE	(Escherichia coli O157:H7 ) [TaxId: 83334 ],	SCOPe (2.08)
F	d3b8of_	Alpha and beta proteins (a+b)	Ferredoxin-like	Bacterial polysaccharide co-polymerase-like	FepE-like	Lipopolysaccharide biosynthesis protein WzzE	(Escherichia coli O157:H7 ) [TaxId: 83334 ],	SCOPe (2.08)
G	d3b8og_	Alpha and beta proteins (a+b)	Ferredoxin-like	Bacterial polysaccharide co-polymerase-like	FepE-like	Lipopolysaccharide biosynthesis protein WzzE	(Escherichia coli O157:H7 ) [TaxId: 83334 ],	SCOPe (2.08)
H	d3b8oh_	Alpha and beta proteins (a+b)	Ferredoxin-like	Bacterial polysaccharide co-polymerase-like	FepE-like	Lipopolysaccharide biosynthesis protein WzzE	(Escherichia coli O157:H7 ) [TaxId: 83334 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	FepE-like	8026610	4001984	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Bacterial polysaccharide co-polymerase-like	8038989	3000641	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Bacterial polysaccharide co-polymerase-like	8038989	3000641	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Bacterial polysaccharide co-polymerase-like	8038989	3000641	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Bacterial polysaccharide co-polymerase-like	8038989	3000641	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Bacterial polysaccharide co-polymerase-like	8038989	3000641	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Bacterial polysaccharide co-polymerase-like	8038989	3000641	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Bacterial polysaccharide co-polymerase-like	8038989	3000641	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Bacterial polysaccharide co-polymerase-like	8038989	3000641	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	GATase_2	e3b8oB1	A: alpha bundles	X: EGF-like	H: General secretion pathway protein M (EpsM) periplasmic domain-related	T: General secretion pathway protein M (EpsM) periplasmic domain-related	F: GATase_2	ECOD (develop294)
C	GATase_2	e3b8oC1	A: alpha bundles	X: EGF-like	H: General secretion pathway protein M (EpsM) periplasmic domain-related	T: General secretion pathway protein M (EpsM) periplasmic domain-related	F: GATase_2	ECOD (develop294)
D	GATase_2	e3b8oD1	A: alpha bundles	X: EGF-like	H: General secretion pathway protein M (EpsM) periplasmic domain-related	T: General secretion pathway protein M (EpsM) periplasmic domain-related	F: GATase_2	ECOD (develop294)
E	GATase_2	e3b8oE1	A: alpha bundles	X: EGF-like	H: General secretion pathway protein M (EpsM) periplasmic domain-related	T: General secretion pathway protein M (EpsM) periplasmic domain-related	F: GATase_2	ECOD (develop294)
F	GATase_2	e3b8oF1	A: alpha bundles	X: EGF-like	H: General secretion pathway protein M (EpsM) periplasmic domain-related	T: General secretion pathway protein M (EpsM) periplasmic domain-related	F: GATase_2	ECOD (develop294)
G	GATase_2	e3b8oG1	A: alpha bundles	X: EGF-like	H: General secretion pathway protein M (EpsM) periplasmic domain-related	T: General secretion pathway protein M (EpsM) periplasmic domain-related	F: GATase_2	ECOD (develop294)
H	GATase_2	e3b8oH1	A: alpha bundles	X: EGF-like	H: General secretion pathway protein M (EpsM) periplasmic domain-related	T: General secretion pathway protein M (EpsM) periplasmic domain-related	F: GATase_2	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.1890.10	Alpha Beta	2-Layer Sandwich	Bacterial polysaccharide co-polymerase-like	FepE-like	CATH (4.3.0)
B	3.30.1890.10	Alpha Beta	2-Layer Sandwich	Bacterial polysaccharide co-polymerase-like	FepE-like	CATH (4.3.0)
C	3.30.1890.10	Alpha Beta	2-Layer Sandwich	Bacterial polysaccharide co-polymerase-like	FepE-like	CATH (4.3.0)
D	3.30.1890.10	Alpha Beta	2-Layer Sandwich	Bacterial polysaccharide co-polymerase-like	FepE-like	CATH (4.3.0)
E	3.30.1890.10	Alpha Beta	2-Layer Sandwich	Bacterial polysaccharide co-polymerase-like	FepE-like	CATH (4.3.0)
F	3.30.1890.10	Alpha Beta	2-Layer Sandwich	Bacterial polysaccharide co-polymerase-like	FepE-like	CATH (4.3.0)
G	3.30.1890.10	Alpha Beta	2-Layer Sandwich	Bacterial polysaccharide co-polymerase-like	FepE-like	CATH (4.3.0)
H	3.30.1890.10	Alpha Beta	2-Layer Sandwich	Bacterial polysaccharide co-polymerase-like	FepE-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF02706	Chain length determinant protein (Wzz)	Chain length determinant protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	Lipopolysaccharide biosynthesis protein wzzE	identical protein binding protein binding binding protein tyrosine kinase activity catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups	carbohydrate derivative biosynthetic process carbohydrate metabolic process polysaccharide biosynthetic process carbohydrate biosynthetic process enterobacterial common antigen biosynthetic process carbohydrate derivative metabolic process primary metabolic process macromolecule biosynthetic process polysaccharide metabolic process biosynthetic process enterobacterial common antigen metabolic process metabolic process cellular process macromolecule metabolic process	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR032895	ECA polysaccharide chain length modulation protein WzzE	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR050445	Bacterial polysaccharide biosynthesis and export	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR003856	Polysaccharide chain length determinant, N-terminal domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.