Crystal structure of thrombin bound to the extracellular fragment of PAR1
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| E | ColA_N | e3befE01 | A: alpha arrays | X: Colicin-A N-terminal domain | H: Colicin-A N-terminal domain | T: Colicin-A N-terminal domain | F: ColA_N | ECOD (v295) |
| B | ColA_N | e3befB01 | A: alpha arrays | X: Colicin-A N-terminal domain | H: Colicin-A N-terminal domain | T: Colicin-A N-terminal domain | F: ColA_N | ECOD (v295) |
| D | Med6 | e3befD1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: Med6 | ECOD (v295) |
| A | Med6 | e3befA1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: Med6 | ECOD (v295) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| E | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (4.3.0) |
| B | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (4.3.0) |
| D | 4.10.140.10 | Few Secondary Structures | Irregular | Epsilon-Thrombin | Chain L | CATH (4.3.0) |
| A | 4.10.140.10 | Few Secondary Structures | Irregular | Epsilon-Thrombin | Chain L | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00089 | Trypsin (Trypsin) | Trypsin | Domain | ||
| PF09396 | Thrombin light chain (Thrombin_light) | Thrombin light chain | Thrombin is an enzyme that cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII. Prothrombin is activated on the surface of a phospholipid membrane where factor Xa removes the activation peptide and cleave ... | Domain |














