3GM8 | pdb_00003gm8

Crystal structure of a beta-glycosidase from Bacteroides vulgatus


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyE-set domains of sugar-utilizing enzymes 8045422 4007565 SCOP2 (2022-06-29)
ASCOP2 FamilyE-set domains of sugar-utilizing enzymes 8090584 4007565 SCOP2 (2022-06-29)
ASCOP2 Familybeta-Galactosidase N-terminal domain-like 8090586 4002476 SCOP2 (2022-06-29)
ASCOP2 Familybeta-Galactosidase/glucuronidase domain 8090588 4007531 SCOP2 (2022-06-29)
ASCOP2 Familybeta-glycanases 8090590 4003164 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyE set domains 8090583 3000070 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyE set domains 8090585 3000070 SCOP2 (2022-06-29)
ASCOP2 Superfamilygalactose-binding domain-like 8090587 3000087 SCOP2 (2022-06-29)
ASCOP2 Superfamilybeta-Galactosidase/glucuronidase domain-like 8090589 3002047 SCOP2 (2022-06-29)
ASCOP2 Superfamily(Trans)glycosidases 8090591 3000313 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AGlyco_hydro_2_Ce3gm8A1 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Thioredoxin-likeT: Thioredoxin-likeF: Glyco_hydro_2_CECOD (v294.1)
AGlyco_hydro_2e3gm8A2 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Thioredoxin-likeT: Thioredoxin-likeF: Glyco_hydro_2ECOD (v294.1)
AC1-sete3gm8A5 A: a/b three-layered sandwichesX: Thioredoxin-likeH: Thioredoxin-likeT: Thioredoxin-likeF: C1-setECOD (v294.1)
AA2M_BRDe3gm8A6 A: a/b three-layered sandwichesX: DP domainH: DP domainT: DP domainF: A2M_BRDECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.120.260 Mainly Beta Sandwich Jelly Rolls Galactose-binding domain-likeCATH (4.3.0)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
A3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)