Crystal structure of the S1-cleaved Notch1 Negative Regulatory Region (NRR)
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | NODP | e3i08D1 | A: a/b three-layered sandwiches | X: Alpha-beta plaits | H: Notch heterodimerization domain | T: Notch heterodimerization domain | F: NODP | ECOD (v294.1) |
| C | Notch | e3i08C1 | A: a/b three-layered sandwiches | X: Transmembrane heme-binding four-helical bundle | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Notch | ECOD (v294.1) |
| C | NOD | e3i08C4 | A: a/b three-layered sandwiches | X: Transmembrane heme-binding four-helical bundle | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: NOD | ECOD (v294.1) |
| A | Notch | e3i08A1 | A: a/b three-layered sandwiches | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Notch | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 6.10.250.470 | Special | Helix non-globular | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
| D | 6.10.250.470 | Special | Helix non-globular | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
| C | 4.10.470.20 | Few Secondary Structures | Irregular | Ricin (A Subunit), domain 2 | CATH (4.3.0) | |
| A | 4.10.470.20 | Few Secondary Structures | Irregular | Ricin (A Subunit), domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF07684 | NOTCH protein (NODP) | NOTCH protein | - | Family | |
| PF06816 | NOTCH protein (NOD) | NOTCH protein | - | Family | |
| PF00066 | LNR domain (Notch) | LNR domain | The LNR (Lin-12/Notch repeat) domain is found in three tandem copies in Notch related proteins. The structure of the domain has been determined by NMR [1] and was shown to contain three disulphide bonds and coordinate a calcium ion. Three repeats ar ... | Domain |














