Crystal structure of the S1-cleaved Notch1 Negative Regulatory Region (NRR)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyNotch domain 8034664 3001708 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyNotch domain 8034664 3001708 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DNODPe3i08D1 A: alpha arraysX: Alpha-beta plaitsH: Notch heterodimerization domainT: Notch heterodimerization domainF: NODPECOD (v295)
BMed6e3i08B1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Med6ECOD (v295)
CNotche3i08C1 A: alpha arraysX: Transmembrane heme-binding four-helical bundleH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: NotchECOD (v295)
CNODe3i08C4 A: alpha arraysX: Transmembrane heme-binding four-helical bundleH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: NODECOD (v295)
ANotche3i08A1 A: alpha arraysX: OB-foldH: Nucleic acid-binding proteinT: Nucleic acid-binding proteinF: NotchECOD (v295)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B, D
PF07684NOTCH protein (NODP)NOTCH protein- Family
A, C
PF06816NOTCH protein (NOD)NOTCH proteinNOTCH signalling plays a fundamental role during a great number of developmental processes in multicellular animals [1-2]. NOD and NODP represent a region present in many NOTCH proteins and NOTCH homologs in multiple species such as NOTCH2 and NOTCH3 ...NOTCH signalling plays a fundamental role during a great number of developmental processes in multicellular animals [1-2]. NOD and NODP represent a region present in many NOTCH proteins and NOTCH homologs in multiple species such as NOTCH2 and NOTCH3, LIN12, SC1 and TAN1. Role of NOD domain remains to be elucidated.
Domain
A, C
PF00066LNR domain (Notch)LNR domainThe LNR (Lin-12/Notch repeat) domain is found in three tandem copies in Notch related proteins. The structure of the domain has been determined by NMR [1] and was shown to contain three disulphide bonds and coordinate a calcium ion. Three repeats ar ...The LNR (Lin-12/Notch repeat) domain is found in three tandem copies in Notch related proteins. The structure of the domain has been determined by NMR [1] and was shown to contain three disulphide bonds and coordinate a calcium ion. Three repeats are also found in the PAPP-A peptidase [2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B, D
Neurogenic locus notch homolog protein 1
A, C
Neurogenic locus notch homolog protein 1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B, D
IPR013032EGF-like, conserved siteConserved Site
B, D
IPR022362Neurogenic locus notch homolog protein 1Family
B, D
IPR001881EGF-like calcium-binding domainDomain
B, D
IPR036770Ankyrin repeat-containing domain superfamilyHomologous Superfamily
B, D
IPR000742EGF-like domainDomain
B, D
IPR051355Notch and Slit guidance proteinFamily
B, D
IPR035993Notch-like domain superfamilyHomologous Superfamily
B, D
IPR011656Notch, NODP domainDomain
B, D
IPR009030Growth factor receptor cysteine-rich domain superfamilyHomologous Superfamily
B, D
IPR010660Notch, NOD domainDomain
B, D
IPR018097EGF-like calcium-binding, conserved siteConserved Site
B, D
IPR002110Ankyrin repeatRepeat
B, D
IPR008297NotchFamily
B, D
IPR049883NOTCH1, EGF-like calcium-binding domainDomain
B, D
IPR000800Notch domainDomain
B, D
IPR024600Notch, C-terminalDomain
B, D
IPR000152EGF-type aspartate/asparagine hydroxylation sitePTM
A, C
IPR013032EGF-like, conserved siteConserved Site
A, C
IPR022362Neurogenic locus notch homolog protein 1Family
A, C
IPR001881EGF-like calcium-binding domainDomain
A, C
IPR036770Ankyrin repeat-containing domain superfamilyHomologous Superfamily
A, C
IPR000742EGF-like domainDomain
A, C
IPR051355Notch and Slit guidance proteinFamily
A, C
IPR035993Notch-like domain superfamilyHomologous Superfamily
A, C
IPR011656Notch, NODP domainDomain
A, C
IPR009030Growth factor receptor cysteine-rich domain superfamilyHomologous Superfamily
A, C
IPR010660Notch, NOD domainDomain
A, C
IPR018097EGF-like calcium-binding, conserved siteConserved Site
A, C
IPR002110Ankyrin repeatRepeat
A, C
IPR008297NotchFamily
A, C
IPR049883NOTCH1, EGF-like calcium-binding domainDomain
A, C
IPR000800Notch domainDomain
A, C
IPR024600Notch, C-terminalDomain
A, C
IPR000152EGF-type aspartate/asparagine hydroxylation sitePTM

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
B, D
P46531
A, C
P46531