3J1E

Cryo-EM structure of 9-fold symmetric rATcpn-beta in apo state


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ACpn60_TCP1_1ste3j1eA1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
ACpn60_TCP1_2nde3j1eA3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
ACpn60_TCP1_2nd_1e3j1eA2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)
BCpn60_TCP1_1ste3j1eB1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
BCpn60_TCP1_2nde3j1eB3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
BCpn60_TCP1_2nd_1e3j1eB2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)
CCpn60_TCP1_1ste3j1eC1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
CCpn60_TCP1_2nde3j1eC3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
CCpn60_TCP1_2nd_1e3j1eC2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)
DCpn60_TCP1_1ste3j1eD1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
DCpn60_TCP1_2nde3j1eD3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
DCpn60_TCP1_2nd_1e3j1eD2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)
ECpn60_TCP1_1ste3j1eE1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
ECpn60_TCP1_2nde3j1eE3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
ECpn60_TCP1_2nd_1e3j1eE2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)
FCpn60_TCP1_1ste3j1eF1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
FCpn60_TCP1_2nde3j1eF3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
FCpn60_TCP1_2nd_1e3j1eF2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)
GCpn60_TCP1_1ste3j1eG1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
GCpn60_TCP1_2nde3j1eG3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
GCpn60_TCP1_2nd_1e3j1eG2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)
HCpn60_TCP1_1ste3j1eH1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
HCpn60_TCP1_2nde3j1eH3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
HCpn60_TCP1_2nd_1e3j1eH2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)
ICpn60_TCP1_1ste3j1eI1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
ICpn60_TCP1_2nde3j1eI3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
ICpn60_TCP1_2nd_1e3j1eI2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)
J [auth K]Cpn60_TCP1_1ste3j1eK1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
J [auth K]Cpn60_TCP1_2nde3j1eK3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
J [auth K]Cpn60_TCP1_2nd_1e3j1eK2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)
K [auth L]Cpn60_TCP1_1ste3j1eL1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
K [auth L]Cpn60_TCP1_2nde3j1eL3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
K [auth L]Cpn60_TCP1_2nd_1e3j1eL2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)
L [auth M]Cpn60_TCP1_1ste3j1eM1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
L [auth M]Cpn60_TCP1_2nde3j1eM3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
L [auth M]Cpn60_TCP1_2nd_1e3j1eM2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)
M [auth N]Cpn60_TCP1_1ste3j1eN1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
M [auth N]Cpn60_TCP1_2nde3j1eN3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
M [auth N]Cpn60_TCP1_2nd_1e3j1eN2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)
N [auth O]Cpn60_TCP1_1ste3j1eO1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
N [auth O]Cpn60_TCP1_2nde3j1eO3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
N [auth O]Cpn60_TCP1_2nd_1e3j1eO2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)
O [auth P]Cpn60_TCP1_1ste3j1eP1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
O [auth P]Cpn60_TCP1_2nde3j1eP3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
O [auth P]Cpn60_TCP1_2nd_1e3j1eP2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)
P [auth Q]Cpn60_TCP1_1ste3j1eQ1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
P [auth Q]Cpn60_TCP1_2nde3j1eQ3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
P [auth Q]Cpn60_TCP1_2nd_1e3j1eQ2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)
Q [auth R]Cpn60_TCP1_1ste3j1eR1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
Q [auth R]Cpn60_TCP1_2nde3j1eR3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
Q [auth R]Cpn60_TCP1_2nd_1e3j1eR2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)
R [auth S]Cpn60_TCP1_1ste3j1eS1 A: alpha bundlesX: GroEL equatorial domain-like (From Topology)H: GroEL equatorial domain-like (From Topology)T: GroEL equatorial domain-likeF: Cpn60_TCP1_1stECOD (1.6)
R [auth S]Cpn60_TCP1_2nde3j1eS3 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: Cpn60_TCP1_2ndECOD (1.6)
R [auth S]Cpn60_TCP1_2nd_1e3j1eS2 A: mixed a+b and a/bX: Zincin-likeH: GroEL-intermediate domain like (From Topology)T: GroEL-intermediate domain likeF: Cpn60_TCP1_2nd_1ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
B,
C,
D,
E,
PF00118TCP-1/cpn60 chaperonin family (Cpn60_TCP1)TCP-1/cpn60 chaperonin family- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
B,
C,
D,
E,
IPR027413GroEL-like equatorial domain superfamilyHomologous Superfamily
A,
B,
C,
D,
E,
IPR054827Thermosome subunit alphaFamily
A,
B,
C,
D,
E,
IPR017998Chaperone tailless complex polypeptide 1 (TCP-1)Family
A,
B,
C,
D,
E,
IPR027410TCP-1-like chaperonin intermediate domain superfamilyHomologous Superfamily
A,
B,
C,
D,
E,
IPR012714Thermosome, archaealFamily
A,
B,
C,
D,
E,
IPR053374TCP-1 chaperonin-containing T-complexFamily
A,
B,
C,
D,
E,
IPR002194Chaperonin TCP-1, conserved siteConserved Site
A,
B,
C,
D,
E,
IPR027409GroEL-like apical domain superfamilyHomologous Superfamily
A,
B,
C,
D,
E,
IPR002423Chaperonin Cpn60/GroEL/TCP-1 familyFamily