3J1E | pdb_00003j1e

Cryo-EM structure of 9-fold symmetric rATcpn-beta in apo state

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
R [auth S]	IU_nuc_hydro	e3j1eS1	A: alpha bundles	X: immunoglobulin/albumin-binding domain-like	H: EGF-related	T: Complement control module/SCR domain	F: IU_nuc_hydro	ECOD (develop294)
Q [auth R]	IU_nuc_hydro	e3j1eR1	A: alpha bundles	X: immunoglobulin/albumin-binding domain-like	H: EGF-related	T: Complement control module/SCR domain	F: IU_nuc_hydro	ECOD (develop294)
P [auth Q]	IU_nuc_hydro	e3j1eQ1	A: alpha bundles	X: immunoglobulin/albumin-binding domain-like	H: EGF-related	T: Complement control module/SCR domain	F: IU_nuc_hydro	ECOD (develop294)
O [auth P]	IU_nuc_hydro	e3j1eP1	A: alpha bundles	X: immunoglobulin/albumin-binding domain-like	H: EGF-related	T: Complement control module/SCR domain	F: IU_nuc_hydro	ECOD (develop294)
N [auth O]	IU_nuc_hydro	e3j1eO1	A: alpha bundles	X: immunoglobulin/albumin-binding domain-like	H: EGF-related	T: Complement control module/SCR domain	F: IU_nuc_hydro	ECOD (develop294)
M [auth N]	IU_nuc_hydro	e3j1eN1	A: alpha bundles	X: immunoglobulin/albumin-binding domain-like	H: EGF-related	T: Complement control module/SCR domain	F: IU_nuc_hydro	ECOD (develop294)
L [auth M]	IU_nuc_hydro	e3j1eM1	A: alpha bundles	X: immunoglobulin/albumin-binding domain-like	H: EGF-related	T: Complement control module/SCR domain	F: IU_nuc_hydro	ECOD (develop294)
K [auth L]	IU_nuc_hydro	e3j1eL1	A: alpha bundles	X: immunoglobulin/albumin-binding domain-like	H: EGF-related	T: Complement control module/SCR domain	F: IU_nuc_hydro	ECOD (develop294)
J [auth K]	IU_nuc_hydro	e3j1eK1	A: alpha bundles	X: immunoglobulin/albumin-binding domain-like	H: EGF-related	T: Complement control module/SCR domain	F: IU_nuc_hydro	ECOD (develop294)
I	IU_nuc_hydro	e3j1eI1	A: alpha bundles	X: immunoglobulin/albumin-binding domain-like	H: EGF-related	T: Complement control module/SCR domain	F: IU_nuc_hydro	ECOD (develop294)
H	IU_nuc_hydro	e3j1eH1	A: alpha bundles	X: immunoglobulin/albumin-binding domain-like	H: EGF-related	T: Complement control module/SCR domain	F: IU_nuc_hydro	ECOD (develop294)
G	IU_nuc_hydro	e3j1eG1	A: alpha bundles	X: immunoglobulin/albumin-binding domain-like	H: EGF-related	T: Complement control module/SCR domain	F: IU_nuc_hydro	ECOD (develop294)
F	IU_nuc_hydro	e3j1eF1	A: alpha bundles	X: immunoglobulin/albumin-binding domain-like	H: EGF-related	T: Complement control module/SCR domain	F: IU_nuc_hydro	ECOD (develop294)
E	IU_nuc_hydro	e3j1eE1	A: alpha bundles	X: immunoglobulin/albumin-binding domain-like	H: EGF-related	T: Complement control module/SCR domain	F: IU_nuc_hydro	ECOD (develop294)
D	IU_nuc_hydro	e3j1eD1	A: alpha bundles	X: immunoglobulin/albumin-binding domain-like	H: EGF-related	T: Complement control module/SCR domain	F: IU_nuc_hydro	ECOD (develop294)
C	IU_nuc_hydro	e3j1eC1	A: alpha bundles	X: immunoglobulin/albumin-binding domain-like	H: EGF-related	T: Complement control module/SCR domain	F: IU_nuc_hydro	ECOD (develop294)
B	IU_nuc_hydro	e3j1eB1	A: alpha bundles	X: immunoglobulin/albumin-binding domain-like	H: EGF-related	T: Complement control module/SCR domain	F: IU_nuc_hydro	ECOD (develop294)
A	IU_nuc_hydro	e3j1eA1	A: alpha bundles	X: immunoglobulin/albumin-binding domain-like	H: EGF-related	T: Complement control module/SCR domain	F: IU_nuc_hydro	ECOD (develop294)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E, A, B, C, D, E, F, G, H, I, J [auth K], K [auth L], L [auth M], M [auth N], N [auth O], O [auth P], P [auth Q], Q [auth R], R [auth S]	Chaperonin beta subunit	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding unfolded protein binding protein binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity ATP-dependent protein folding chaperone protein folding chaperone identical protein binding	-	cellular anatomical structure intracellular anatomical structure cytoplasm protein-containing complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E, A, B, C, D, E, F, G, H, I, J [auth K], K [auth L], L [auth M], M [auth N], N [auth O], O [auth P], P [auth Q], Q [auth R], R [auth S]	IPR027413	GroEL-like equatorial domain superfamily	Homologous Superfamily
A, B, C, D, E, A, B, C, D, E, F, G, H, I, J [auth K], K [auth L], L [auth M], M [auth N], N [auth O], O [auth P], P [auth Q], Q [auth R], R [auth S]	IPR053374	TCP-1_chaperonin	Unknown
A, B, C, D, E, A, B, C, D, E, F, G, H, I, J [auth K], K [auth L], L [auth M], M [auth N], N [auth O], O [auth P], P [auth Q], Q [auth R], R [auth S]	IPR027410	TCP-1-like chaperonin intermediate domain superfamily	Homologous Superfamily
A, B, C, D, E, A, B, C, D, E, F, G, H, I, J [auth K], K [auth L], L [auth M], M [auth N], N [auth O], O [auth P], P [auth Q], Q [auth R], R [auth S]	IPR054827	TCP-1 chaperonin-like	Family
A, B, C, D, E, A, B, C, D, E, F, G, H, I, J [auth K], K [auth L], L [auth M], M [auth N], N [auth O], O [auth P], P [auth Q], Q [auth R], R [auth S]	IPR012714	Chaperonin/Thermosome	Family
A, B, C, D, E, A, B, C, D, E, F, G, H, I, J [auth K], K [auth L], L [auth M], M [auth N], N [auth O], O [auth P], P [auth Q], Q [auth R], R [auth S]	IPR017998	T-complex protein 1	Family
A, B, C, D, E, A, B, C, D, E, F, G, H, I, J [auth K], K [auth L], L [auth M], M [auth N], N [auth O], O [auth P], P [auth Q], Q [auth R], R [auth S]	IPR002194	Chaperonin TCP-1, conserved site	Conserved Site
A, B, C, D, E, A, B, C, D, E, F, G, H, I, J [auth K], K [auth L], L [auth M], M [auth N], N [auth O], O [auth P], P [auth Q], Q [auth R], R [auth S]	IPR027409	GroEL-like apical domain superfamily	Homologous Superfamily
A, B, C, D, E, A, B, C, D, E, F, G, H, I, J [auth K], K [auth L], L [auth M], M [auth N], N [auth O], O [auth P], P [auth Q], Q [auth R], R [auth S]	IPR002423	Chaperonin Cpn60/GroEL/TCP-1 family	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.