3J7R | pdb_00003j7r

Structure of the translating mammalian ribosome-Sec61 complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
G [auth D]SCOP2 FamilyRibosomal protein L5e and archael L18-like 8049682 4006591 SCOP2 (2022-06-29)
G [auth D]SCOP2 SuperfamilyTranslational machinery components 8052879 3000571 SCOP2 (2022-06-29)
L [auth I]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8099256 3000884 SCOP2B (2022-06-29)
M [auth J]SCOP2B SuperfamilyRL5-like 8073896 3001709 SCOP2B (2022-06-29)
N [auth L]SCOP2B SuperfamilyRibosomal protein L13e-like 8096882 3002162 SCOP2B (2022-06-29)
P [auth N]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8096618 3000210 SCOP2B (2022-06-29)
R [auth P]SCOP2 FamilyRibosomal protein L22 8096623 4001212 SCOP2 (2022-06-29)
R [auth P]SCOP2 SuperfamilyRibosomal protein L22 8096624 3001078 SCOP2 (2022-06-29)
W [auth U]SCOP2B Superfamily60S Ribosomal protein L22e 8053061 3002158 SCOP2B (2022-06-29)
X [auth V]SCOP2B Superfamily50S Ribosomal protein L14-like 8098864 3000433 SCOP2B (2022-06-29)
AA [auth Y]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096888 3000334 SCOP2B (2022-06-29)
BA [auth Z]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053051 3000334 SCOP2B (2022-06-29)
CA [auth a]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8096880 3001045 SCOP2B (2022-06-29)
DA [auth b]SCOP2 FamilyRibosomal protein L29e 8049523 4006531 SCOP2 (2022-06-29)
DA [auth b]SCOP2 SuperfamilyRibosomal protein L29e 8053041 3002157 SCOP2 (2022-06-29)
EA [auth c]SCOP2B SuperfamilyL30e-like 8096886 3001739 SCOP2B (2022-06-29)
GA [auth e]SCOP2B SuperfamilyRibosomal protein L32e 8102190 3000982 SCOP2B (2022-06-29)
IA [auth g]SCOP2 FamilyRibosomal protein L34e-like 8048727 4006193 SCOP2 (2022-06-29)
IA [auth g]SCOP2 SuperfamilyRibosomal protein L34e-like 8053544 3002203 SCOP2 (2022-06-29)
MA [auth k]SCOP2 FamilyRibosomal L38e protein-like 8049535 4006532 SCOP2 (2022-06-29)
MA [auth k]SCOP2 SuperfamilyRibosomal L38e protein-like 8053571 3002206 SCOP2 (2022-06-29)
NA [auth l]SCOP2B SuperfamilyRibosomal protein L39e 8098012 3001756 SCOP2B (2022-06-29)
OA [auth m]SCOP2 FamilyRibosomal protein L40e 8101562 4002847 SCOP2 (2022-06-29)
OA [auth m]SCOP2 SuperfamilyZn-binding ribosomal proteins 8101563 3001320 SCOP2 (2022-06-29)
UA [auth 1]SCOP2 FamilySecY-like 8096883 4001751 SCOP2 (2022-06-29)
UA [auth 1]SCOP2 SuperfamilySecY-like 8096884 3000333 SCOP2 (2022-06-29)
YA [auth SA]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8052794 3001397 SCOP2B (2022-06-29)
ZA [auth SB]SCOP2B SuperfamilyRibosomal S3Ae-like 8053206 3002166 SCOP2B (2022-06-29)
CB [auth SE]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8052775 3000334 SCOP2B (2022-06-29)
CB [auth SE]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8052773 3001473 SCOP2B (2022-06-29)
CB [auth SE]SCOP2B SuperfamilyNucleic acid-binding proteins 8052774 3000135 SCOP2B (2022-06-29)
DB [auth SF]SCOP2B SuperfamilyRibosomal protein S7 8066005 3000799 SCOP2B (2022-06-29)
KB [auth SM]SCOP2 FamilyL30e/L7ae ribosomal proteins 8094792 4001513 SCOP2 (2022-06-29)
KB [auth SM]SCOP2 SuperfamilyL30e-like 8094793 3001739 SCOP2 (2022-06-29)
OB [auth SQ]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8099258 3000100 SCOP2B (2022-06-29)
QB [auth SS]SCOP2 FamilyRibosomal protein S13 8101556 4000260 SCOP2 (2022-06-29)
QB [auth SS]SCOP2 SuperfamilyS13-like H2TH domain 8101557 3000053 SCOP2 (2022-06-29)
RB [auth ST]SCOP2 FamilyRps19E-like 8096877 4000222 SCOP2 (2022-06-29)
RB [auth ST]SCOP2 SuperfamilyWinged helix DNA-binding domain 8096878 3000034 SCOP2 (2022-06-29)
SB [auth SU]SCOP2 FamilyRibosomal protein S10 8097027 4001240 SCOP2 (2022-06-29)
SB [auth SU]SCOP2 SuperfamilyRibosomal protein S10 8097028 3001336 SCOP2 (2022-06-29)
TB [auth SV]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053134 3000068 SCOP2B (2022-06-29)
YB [auth Sa]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053144 3000068 SCOP2B (2022-06-29)
AC [auth Sc]SCOP2 FamilyCold shock DNA-binding domain-like 8099837 4001909 SCOP2 (2022-06-29)
AC [auth Sc]SCOP2 SuperfamilyNucleic acid-binding proteins 8099838 3000135 SCOP2 (2022-06-29)
BC [auth Sd]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052596 3000068 SCOP2B (2022-06-29)
EC [auth Sg]SCOP2 FamilyWD40-repeat 8098887 4002744 SCOP2 (2022-06-29)
EC [auth Sg]SCOP2 SuperfamilyWD40 repeat-like 8098888 3001694 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth A]Rhve3j7rA1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
E [auth B]Rhve3j7rB1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
F [auth C]EryCIII-like_Ne3j7rC1 A: alpha bundlesX: Rubredoxin-likeH: Ferritin/Heme oxygenaseT: Heme oxygenase/Ribonucleotide reductaseF: EryCIII-like_NECOD (develop294)
G [auth D]Rhve3j7rD1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
H [auth E]Rhve3j7rE1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
I [auth F]Rhve3j7rF1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
J [auth G]Rhve3j7rG1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
K [auth H]Rhve3j7rH1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
L [auth I]Rhve3j7rI1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
M [auth J]Rhve3j7rJ1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
N [auth L]V_ATPase_Ie3j7rL1 A: alpha bundlesX: Alpha-beta plaitsH: Pseudouridine synthaseT: Pseudouridine synthaseF: V_ATPase_IECOD (develop294)
O [auth M]Rhve3j7rM1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
P [auth N]Rhve3j7rN1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
Q [auth O]Rhve3j7rO1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
R [auth P]Rhve3j7rP1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
S [auth Q]Rhve3j7rQ1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
T [auth R]ArsA_ATPase, ParAe3j7rR1 A: alpha bundlesX: Anticodon-binding domain of Class II aaRSH: Anticodon-binding domain of Class II aaRST: Anticodon-binding domain of Class II aaRSF: ArsA_ATPase, ParAECOD (develop294)
U [auth S]Rhve3j7rS1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
V [auth T]Rhve3j7rT1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
W [auth U]KAsynt_C_assoce3j7rU1 A: alpha bundlesX: Type II ABC importer transmembrane domain foldH: Type II ABC importer transmembrane domain foldT: Type II ABC importer transmembrane domain foldF: KAsynt_C_assocECOD (develop294)
X [auth V]Rhve3j7rV1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
Y [auth W]Rhve3j7rW1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
Z [auth X]Rhve3j7rX1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
AA [auth Y]Rhve3j7rY1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
BA [auth Z]Rhve3j7rZ1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
CA [auth a]Fice3j7ra1 A: alpha bundlesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: FicECOD (develop294)
DA [auth b]V_ATPase_Ie3j7rb1 A: alpha bundlesX: Alpha-beta plaitsH: Pseudouridine synthaseT: Pseudouridine synthaseF: V_ATPase_IECOD (develop294)
EA [auth c]Rhve3j7rc1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
FA [auth d]Rhve3j7rd1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
GA [auth e]Rhve3j7re1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
HA [auth f]Rhve3j7rf1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
IA [auth g]V_ATPase_Ie3j7rg1 A: alpha bundlesX: Alpha-beta plaitsH: Pseudouridine synthaseT: Pseudouridine synthaseF: V_ATPase_IECOD (develop294)
JA [auth h]Rhve3j7rh1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
KA [auth i]KAsynt_C_assoce3j7ri1 A: alpha bundlesX: Type II ABC importer transmembrane domain foldH: Type II ABC importer transmembrane domain foldT: Type II ABC importer transmembrane domain foldF: KAsynt_C_assocECOD (develop294)
LA [auth j]Rhve3j7rj1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
MA [auth k]V_ATPase_Ie3j7rk1 A: alpha bundlesX: Alpha-beta plaitsH: Pseudouridine synthaseT: Pseudouridine synthaseF: V_ATPase_IECOD (develop294)
NA [auth l]Rhve3j7rl1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
OA [auth m]Rhve3j7rm1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
QA [auth o]Rhve3j7ro1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
RA [auth p]Rhve3j7rp1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
SA [auth r]MG1e3j7rr1 A: alpha bundlesX: Alpha-beta plaitsH: Pseudouridine synthaseT: Pseudouridine synthaseF: MG1ECOD (develop294)
TA [auth z]Rhve3j7rz1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
UA [auth 1]Rhve3j7r11 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
VA [auth 2]Rhve3j7r21 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
YA [auth SA]FlaF_Ig-likee3j7rSA1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: FlaF_Ig-likeECOD (develop294)
ZA [auth SB]Rhve3j7rSB1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
AB [auth SC]Toxin_R_bind_Ne3j7rSC2 A: alpha bundlesX: jelly-rollH: Acetamidase/Formamidase-likeT: Acetamidase/Formamidase-likeF: Toxin_R_bind_NECOD (develop294)
AB [auth SC]Viral_coate3j7rSC3 A: alpha bundlesX: TIM beta/alpha-barrelH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Viral_coatECOD (develop294)
CB [auth SE]Rhve3j7rSE1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
DB [auth SF]Rhve3j7rSF1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
EB [auth SG]Rhve3j7rSG1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
FB [auth SH]Rhve3j7rSH1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
GB [auth SI]Rhve3j7rSI1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
HB [auth SJ]FlaF_Ig-likee3j7rSJ1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: FlaF_Ig-likeECOD (develop294)
IB [auth SK]Rhve3j7rSK1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
JB [auth SL]Ribosomal_S17,Ribosomal_S17_Ne3j7rSL1 A: alpha bundlesX: OB-foldH: Nucleic acid-binding proteinT: Nucleic acid-binding proteinF: Ribosomal_S17,Ribosomal_S17_NECOD (develop294)
KB [auth SM]Rhve3j7rSM1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
LB [auth SN]Rhve3j7rSN1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
MB [auth SO]Rhve3j7rSO1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
NB [auth SP]Ribosomal_S17,Ribosomal_S17_Ne3j7rSP1 A: alpha bundlesX: OB-foldH: Nucleic acid-binding proteinT: Nucleic acid-binding proteinF: Ribosomal_S17,Ribosomal_S17_NECOD (develop294)
OB [auth SQ]Cellulasee3j7rSQ1 A: alpha bundlesX: HAD domain-likeH: HAD domain-relatedT: PIN domain-likeF: CellulaseECOD (develop294)
PB [auth SR]Rhve3j7rSR1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
QB [auth SS]FlaF_Ig-likee3j7rSS1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: FlaF_Ig-likeECOD (develop294)
RB [auth ST]Rhve3j7rST1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
SB [auth SU]Rhve3j7rSU1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
TB [auth SV]Rhve3j7rSV1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
UB [auth SW]Rhve3j7rSW1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
VB [auth SX]Rhve3j7rSX1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
WB [auth SY]Rhve3j7rSY1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
XB [auth SZ]Rhve3j7rSZ1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
YB [auth Sa]Rhve3j7rSa1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
ZB [auth Sb]Rhve3j7rSb1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
AC [auth Sc]Rhve3j7rSc1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
BC [auth Sd]Rhve3j7rSd1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
CC [auth Se]KAsynt_C_assoce3j7rSe1 A: alpha bundlesX: Type II ABC importer transmembrane domain foldH: Type II ABC importer transmembrane domain foldT: Type II ABC importer transmembrane domain foldF: KAsynt_C_assocECOD (develop294)
DC [auth Sf]Rhve3j7rSf1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
EC [auth Sg]Rhve3j7rSg1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)
BB [auth SD]Rhve3j7rSD1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: RhvECOD (develop294)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
E [auth B]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
F [auth C]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins. Domain
F [auth C]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
G [auth D]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
G [auth D]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
G [auth D]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins. Domain
H [auth E]PF03868Ribosomal protein L6, N-terminal domain (Ribosomal_L6e_N)Ribosomal protein L6, N-terminal domainDomain
H [auth E]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
K [auth H]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
K [auth H]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
L [auth I]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
M [auth J]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
M [auth J]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
N [auth L]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
O [auth M]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e familyBovine L40 has been identified as a secondary RNA binding protein [1]. L40 is fused to a ubiquitin protein [2]. Domain
O [auth M]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
P [auth N]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
Q [auth O]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
R [auth P]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
U [auth S]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A. Domain
X [auth V]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
Y [auth W]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24eDomain
BA [auth Z]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
BA [auth Z]PF00467KOW motif (KOW)KOW motif- Family
YA [auth SA]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
YA [auth SA]PF1612240S ribosomal protein SA C-terminus (40S_SA_C)40S ribosomal protein SA C-terminus- Family
ZA [auth SB]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
AB [auth SC]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
AB [auth SC]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
CB [auth SE]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
CB [auth SE]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
CB [auth SE]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1]. Domain
CB [auth SE]PF00467KOW motif (KOW)KOW motif- Family
DB [auth SF]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
EB [auth SG]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
FB [auth SH]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
KB [auth SM]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
LB [auth SN]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
NB [auth SP]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
OB [auth SQ]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
PB [auth SR]PF00833Ribosomal S17 (Ribosomal_S17e)Ribosomal S17- Family
QB [auth SS]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
SB [auth SU]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
TB [auth SV]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
VB [auth SX]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
WB [auth SY]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
BB [auth SD]PF07650KH domain (KH_2)KH domainDomain
BB [auth SD]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
BB [auth SD]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 5]28S ribosomal RNA---
B [auth 7]5S ribosomal RNA---
C [auth 8]5.8S ribosomal RNA---
D [auth A]Ribosomal protein uL2---
E [auth B]Ribosomal protein uL3---
F [auth C]Ribosomal protein uL4
G [auth D]Ribosomal protein uL18
H [auth E]Ribosomal protein eL6
I [auth F]Ribosomal protein uL30---
J [auth G]Ribosomal protein eL8
K [auth H]Ribosomal protein uL6
L [auth I]Ribosomal protein uL16
M [auth J]Ribosomal protein uL5
N [auth L]Ribosomal protein eL13
O [auth M]Ribosomal protein eL14
P [auth N]Ribosomal protein eL15
Q [auth O]Ribosomal protein uL13---
R [auth P]Ribosomal protein uL22
S [auth Q]Ribosomal protein eL18---
T [auth R]Ribosomal protein eL19---
U [auth S]Ribosomal protein eL20
V [auth T]Ribosomal protein eL21
W [auth U]Ribosomal protein eL22
X [auth V]Ribosomal protein uL14
Y [auth W]Ribosomal protein eL24 -
Z [auth X]Ribosomal protein uL23---
AA [auth Y]Ribosomal protein uL24
BA [auth Z]Ribosomal protein eL27
CA [auth a]Ribosomal protein uL15
DA [auth b]Ribosomal protein eL29
EA [auth c]Ribosomal protein eL30 -
FA [auth d]Ribosomal protein eL31
GA [auth e]Ribosomal protein eL32
HA [auth f]Ribosomal protein eL33---
IA [auth g]Ribosomal protein eL34
JA [auth h]Ribosomal protein uL29
KA [auth i]Ribosomal protein eL36---
LA [auth j]Ribosomal protein eL37---
MA [auth k]Ribosomal protein eL38
NA [auth l]Ribosomal protein eL39
OA [auth m]Ribosomal protein eL40
PA [auth n]Ribosomal protein eL41---
QA [auth o]Ribosomal protein eL42
RA [auth p]Ribosomal protein eL43---
SA [auth r]Ribosomal protein eL28---
TA [auth z]Ribosomal protein uL1---
UA [auth 1]Sec61 alpha subunit
VA [auth 2]Sec61 gamma subunit---
WA [auth 3]Sec61 beta subunit---
XA [auth S2]18S ribosomal RNA---
YA [auth SA]Ribosomal protein uS2
ZA [auth SB]Ribosomal protein eS1
AB [auth SC]Ribosomal protein uS5
CB [auth SE]Ribosomal protein eS4
DB [auth SF]Ribosomal protein uS7
EB [auth SG]Ribosomal protein eS6---
FB [auth SH]Ribosomal protein eS7
GB [auth SI]Ribosomal protein eS8---
HB [auth SJ]Ribosomal protein uS4---
IB [auth SK]Ribosomal protein eS10---
JB [auth SL]Ribosomal protein uS17---
KB [auth SM]Ribosomal protein eS12
LB [auth SN]Ribosomal protein uS15
MB [auth SO]Ribosomal protein uS11---
NB [auth SP]Ribosomal protein uS19
OB [auth SQ]Ribosomal protein uS9
PB [auth SR]Ribosomal protein eS17
QB [auth SS]Ribosomal protein uS13
RB [auth ST]Ribosomal protein eS19
SB [auth SU]Ribosomal protein uS10
TB [auth SV]Ribosomal protein eS21
UB [auth SW]Ribosomal protein uS8---
VB [auth SX]Ribosomal protein uS12
WB [auth SY]Ribosomal protein eS24
XB [auth SZ]Ribosomal protein es25---
YB [auth Sa]Ribosomal protein eS26
ZB [auth Sb]Ribosomal protein eS27
AC [auth Sc]Ribosomal protein eS28
BC [auth Sd]Ribosomal protein uS14
CC [auth Se]Ribosomal protein eS30---
DC [auth Sf]Ribosomal protein eS31
EC [auth Sg]Ribosomal protein RACK1
FC [auth S4]Messenger RNA---
GC [auth S5]A/P tRNA---
HC [auth S6]P/E tRNA---
BB [auth SD]Ribosomal protein uS3

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
F [auth C]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
F [auth C]IPR002136Large ribosomal subunit protein uL4Family
F [auth C]IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
F [auth C]IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
F [auth C]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
G [auth D]IPR057268Large ribosomal subunit protein uL18Family
G [auth D]IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
G [auth D]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
H [auth E]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
H [auth E]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
H [auth E]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
H [auth E]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
H [auth E]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
H [auth E]IPR000915Large ribosomal subunit protein eL6Family
J [auth G]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
J [auth G]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
J [auth G]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
J [auth G]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
J [auth G]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
J [auth G]IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
K [auth H]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
K [auth H]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
K [auth H]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
K [auth H]IPR000702Large ribosomal subunit protein uL6-likeFamily
L [auth I]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
L [auth I]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryota/archaeaConserved Site
L [auth I]IPR047873Large ribosomal subunit protein uL16Family
L [auth I]IPR001197Large ribosomal subunit protein uL16, eukaryota/archaeaFamily
L [auth I]IPR016180Large ribosomal subunit protein uL16 domainDomain
M [auth J]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
M [auth J]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
M [auth J]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
M [auth J]IPR057266Large ribosomal subunit protein uL5, eukaryota/archaeaFamily
M [auth J]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
M [auth J]IPR002132Large ribosomal subunit protein uL5Family
N [auth L]IPR001380Large ribosomal subunit protein eL13Family
N [auth L]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
O [auth M]IPR039660Large ribosomal subunit protein eL14Family
O [auth M]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
O [auth M]IPR002784Large ribosomal subunit protein eL14 domainDomain
O [auth M]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
P [auth N]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
P [auth N]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
P [auth N]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
P [auth N]IPR000439Large ribosomal subunit protein eL15Family
R [auth P]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
R [auth P]IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
R [auth P]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
R [auth P]IPR001063Large ribosomal subunit protein uL22Family
R [auth P]IPR057265Large ribosomal subunit protein uL22, archaeaFamily
U [auth S]IPR028877Large ribosomal subunit protein eL20Family
U [auth S]IPR023573Large ribosomal subunit protein eL20 domainDomain
U [auth S]IPR021138Large ribosomal subunit protein eL20, eukaryotaFamily
V [auth T]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
V [auth T]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
V [auth T]IPR001147Large ribosomal subunit protein eL21Family
V [auth T]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
W [auth U]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
W [auth U]IPR002671Large ribosomal subunit protein eL22Family
X [auth V]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
X [auth V]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
X [auth V]IPR000218Large ribosomal subunit protein uL14Family
Y [auth W]IPR011017TRASH domainDomain
Y [auth W]IPR056366Large ribosomal subunit protein eL24Family
Y [auth W]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
Y [auth W]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
Y [auth W]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
AA [auth Y]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
AA [auth Y]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
AA [auth Y]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
AA [auth Y]IPR005824KOWDomain
AA [auth Y]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
AA [auth Y]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
BA [auth Z]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
BA [auth Z]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
BA [auth Z]IPR005824KOWDomain
BA [auth Z]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
BA [auth Z]IPR001141Large ribosomal subunit protein eL27Family
BA [auth Z]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
CA [auth a]IPR021131Large ribosomal subunit protein uL15/eL18Domain
CA [auth a]IPR030878Large ribosomal subunit protein uL15Family
CA [auth a]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
CA [auth a]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
DA [auth b]IPR002673Large ribosomal subunit protein eL29Family
EA [auth c]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
EA [auth c]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
EA [auth c]IPR000231Large ribosomal subunit protein eL30Family
EA [auth c]IPR039109Large ribosomal subunit protein eL30-likeFamily
EA [auth c]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
FA [auth d]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
FA [auth d]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
FA [auth d]IPR000054Large ribosomal subunit protein eL31Family
GA [auth e]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
GA [auth e]IPR001515Large ribosomal subunit protein eL32Family
GA [auth e]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
IA [auth g]IPR008195Large ribosomal subunit protein eL34Family
IA [auth g]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
IA [auth g]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
JA [auth h]IPR001854Large ribosomal subunit protein uL29Family
JA [auth h]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
JA [auth h]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
JA [auth h]IPR045059Large ribosomal subunit protein uL29, eukaryotaFamily
MA [auth k]IPR002675Large ribosomal subunit protein eL38Family
MA [auth k]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
NA [auth l]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
NA [auth l]IPR000077Large ribosomal subunit protein eL39Family
NA [auth l]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
OA [auth m]IPR019954Ubiquitin conserved siteConserved Site
OA [auth m]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
OA [auth m]IPR000626Ubiquitin-like domainDomain
OA [auth m]IPR019956Ubiquitin domainDomain
OA [auth m]IPR050158Ubiquitin and ubiquitin-likeFamily
OA [auth m]IPR001975Large ribosomal subunit protein eL40 domainDomain
OA [auth m]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
QA [auth o]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
QA [auth o]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
QA [auth o]IPR000552Large ribosomal subunit protein eL42Family
UA [auth 1]IPR002208SecY/SEC61-alpha familyFamily
UA [auth 1]IPR030659SecY conserved siteConserved Site
UA [auth 1]IPR019561Translocon Sec61/SecY, plug domainDomain
UA [auth 1]IPR023201SecY domain superfamilyHomologous Superfamily
YA [auth SA]IPR032281Small ribosomal subunit protein uS2, C-terminal domainDomain
YA [auth SA]IPR027498Small ribosomal subunit protein uS2, eukaryotaFamily
YA [auth SA]IPR027504Small ribosomal subunit protein uS2, vertebratesFamily
YA [auth SA]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
YA [auth SA]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
YA [auth SA]IPR001865Small ribosomal subunit protein uS2Family
YA [auth SA]IPR005707Small ribosomal subunit protein uS2, eukaryota/archaeaFamily
ZA [auth SB]IPR001593Small ribosomal subunit protein eS1Family
ZA [auth SB]IPR027500Small ribosomal subunit protein eS1, eukaryotaFamily
AB [auth SC]IPR005711Small ribosomal subunit protein uS5, eukaryota_archaeaFamily
AB [auth SC]IPR000851Small ribosomal subunit protein uS5Family
AB [auth SC]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
AB [auth SC]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
AB [auth SC]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
AB [auth SC]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
AB [auth SC]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
CB [auth SE]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
CB [auth SE]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
CB [auth SE]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
CB [auth SE]IPR002942RNA-binding S4 domainDomain
CB [auth SE]IPR013845Small ribosomal subunit protein eS4, central regionDomain
CB [auth SE]IPR000876Small ribosomal subunit protein eS4Family
CB [auth SE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
CB [auth SE]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
CB [auth SE]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
CB [auth SE]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
CB [auth SE]IPR005824KOWDomain
DB [auth SF]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
DB [auth SF]IPR000235Small ribosomal subunit protein uS7Family
DB [auth SF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
DB [auth SF]IPR023798Small ribosomal subunit protein uS7 domainDomain
DB [auth SF]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
FB [auth SH]IPR000554Small ribosomal subunit protein eS7Family
FB [auth SH]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
KB [auth SM]IPR000530Small ribosomal subunit protein eS12Family
KB [auth SM]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
KB [auth SM]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
KB [auth SM]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
LB [auth SN]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
LB [auth SN]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
LB [auth SN]IPR000589Small ribosomal subunit protein uS15Family
LB [auth SN]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotaFamily
NB [auth SP]IPR002222Small ribosomal subunit protein uS19Family
NB [auth SP]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
NB [auth SP]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
NB [auth SP]IPR005713Small ribosomal subunit protein uS19, eukaryota/archaeaFamily
OB [auth SQ]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
OB [auth SQ]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
OB [auth SQ]IPR000754Small ribosomal subunit protein uS9Family
OB [auth SQ]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
PB [auth SR]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
PB [auth SR]IPR001210Small ribosomal subunit protein eS17Family
PB [auth SR]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
QB [auth SS]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
QB [auth SS]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
QB [auth SS]IPR001892Small ribosomal subunit protein uS13Family
QB [auth SS]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
RB [auth ST]IPR001266Small ribosomal subunit protein eS19Family
RB [auth ST]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
RB [auth ST]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
RB [auth ST]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
SB [auth SU]IPR001848Small ribosomal subunit protein uS10Family
SB [auth SU]IPR027486Small ribosomal subunit protein uS10 domainDomain
SB [auth SU]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
SB [auth SU]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
SB [auth SU]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
TB [auth SV]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
TB [auth SV]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
TB [auth SV]IPR001931Small ribosomal subunit protein eS21Family
VB [auth SX]IPR006032Small ribosomal subunit protein uS12Family
VB [auth SX]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
VB [auth SX]IPR005680Small ribosomal subunit protein uS12, eukaryota/archaeaFamily
WB [auth SY]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
WB [auth SY]IPR001976Small ribosomal subunit protein eS24Family
WB [auth SY]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
WB [auth SY]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
YB [auth Sa]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
YB [auth Sa]IPR000892Small ribosomal subunit protein eS26Family
YB [auth Sa]IPR047864Ribosomal protein eS26, conserved siteConserved Site
ZB [auth Sb]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
ZB [auth Sb]IPR000592Small ribosomal subunit protein eS27Family
ZB [auth Sb]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AC [auth Sc]IPR028626Ribosomal protein eS28 conserved siteConserved Site
AC [auth Sc]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
AC [auth Sc]IPR000289Small ribosomal subunit protein eS28Family
BC [auth Sd]IPR001209Small ribosomal subunit protein uS14Family
BC [auth Sd]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
BC [auth Sd]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
BC [auth Sd]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
DC [auth Sf]IPR019954Ubiquitin conserved siteConserved Site
DC [auth Sf]IPR000626Ubiquitin-like domainDomain
DC [auth Sf]IPR038582Small ribosomal subunit protein eS31 eukaryotic superfamilyHomologous Superfamily
DC [auth Sf]IPR002906Small ribosomal subunit protein eS31Domain
DC [auth Sf]IPR019956Ubiquitin domainDomain
DC [auth Sf]IPR050158Ubiquitin and ubiquitin-likeFamily
DC [auth Sf]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
DC [auth Sf]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
EC [auth Sg]IPR019775WD40 repeat, conserved siteConserved Site
EC [auth Sg]IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
EC [auth Sg]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
EC [auth Sg]IPR045223Small ribosomal subunit protein RACK1-likeFamily
EC [auth Sg]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
EC [auth Sg]IPR001680WD40 repeatRepeat
BB [auth SD]IPR005703Small ribosomal subunit protein uS3, eukaryota/archaealFamily
BB [auth SD]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
BB [auth SD]IPR004044K Homology domain, type 2Domain
BB [auth SD]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
BB [auth SD]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
BB [auth SD]IPR057258Small ribosomal subunit protein uS3Family
BB [auth SD]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
BB [auth SD]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site