Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B [auth AB] | SCOP2 Family | Ribosomal protein S2-like | 8063831 | 4003744 | SCOP2 (2022-06-29) |
| B [auth AB] | SCOP2 Superfamily | SIS domain/Ribosomal protein S2-like | 8063832 | 3001397 | SCOP2 (2022-06-29) |
| D [auth AD] | SCOP2 Family | Ribosomal protein S4 | 8083389 | 4001399 | SCOP2 (2022-06-29) |
| D [auth AD] | SCOP2 Superfamily | Alpha-L RNA-binding motif | 8083390 | 3001473 | SCOP2 (2022-06-29) |
| F [auth AF] | SCOP2 Family | Ribosomal protein S6 | 8066496 | 4001337 | SCOP2 (2022-06-29) |
| F [auth AF] | SCOP2 Superfamily | Ribosomal protein S6 | 8066497 | 3001323 | SCOP2 (2022-06-29) |
| G [auth AG] | SCOP2 Family | Ribosomal protein S7 | 8066028 | 4001112 | SCOP2 (2022-06-29) |
| G [auth AG] | SCOP2 Superfamily | Ribosomal protein S7 | 8066029 | 3000799 | SCOP2 (2022-06-29) |
| H [auth AH] | SCOP2 Family | Ribosomal protein S8 | 8079050 | 4002027 | SCOP2 (2022-06-29) |
| H [auth AH] | SCOP2 Superfamily | Ribosomal protein S8 | 8079051 | 3000709 | SCOP2 (2022-06-29) |
| I [auth AI] | SCOP2 Family | Translational machinery components | 8082666 | 4000951 | SCOP2 (2022-06-29) |
| I [auth AI] | SCOP2 Superfamily | Ribosomal protein S5 domain 2-like | 8082667 | 3000100 | SCOP2 (2022-06-29) |
| J [auth AJ] | SCOP2B Superfamily | Ribosomal protein S10 | 8098572 | 3001336 | SCOP2B (2022-06-29) |
| K [auth AK] | SCOP2B Superfamily | Translational machinery components | 8098278 | 3000571 | SCOP2B (2022-06-29) |
| L [auth AL] | SCOP2 Family | Cold shock DNA-binding domain-like | 8098573 | 4001909 | SCOP2 (2022-06-29) |
| L [auth AL] | SCOP2 Superfamily | Nucleic acid-binding proteins | 8098574 | 3000135 | SCOP2 (2022-06-29) |
| M [auth AM] | SCOP2 Family | Ribosomal protein S13 | 8098563 | 4000260 | SCOP2 (2022-06-29) |
| M [auth AM] | SCOP2 Superfamily | S13-like H2TH domain | 8098564 | 3000053 | SCOP2 (2022-06-29) |
| N [auth AN] | SCOP2 Family | Ribosomal protein S14p/S29e | 8047589 | 4003647 | SCOP2 (2022-06-29) |
| N [auth AN] | SCOP2 Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8052595 | 3000068 | SCOP2 (2022-06-29) |
| O [auth AO] | SCOP2 Family | 30S Ribosomal protein S15 / 40S Ribosomal protein S13 | 8072616 | 4000767 | SCOP2 (2022-06-29) |
| O [auth AO] | SCOP2 Superfamily | S15/NS1 RNA-binding domain | 8072617 | 3001284 | SCOP2 (2022-06-29) |
| P [auth AP] | SCOP2 Family | Ribosomal protein S16 | 8066552 | 4001077 | SCOP2 (2022-06-29) |
| P [auth AP] | SCOP2 Superfamily | Ribosomal protein S16 | 8066553 | 3000680 | SCOP2 (2022-06-29) |
| Q [auth AQ] | SCOP2 Family | Cold shock DNA-binding domain-like | 8059269 | 4001909 | SCOP2 (2022-06-29) |
| Q [auth AQ] | SCOP2 Superfamily | Nucleic acid-binding proteins | 8059270 | 3000135 | SCOP2 (2022-06-29) |
| S [auth AS] | SCOP2 Family | Ribosomal protein S19 | 8086055 | 4001081 | SCOP2 (2022-06-29) |
| S [auth AS] | SCOP2 Superfamily | Ribosomal protein S19 | 8086056 | 3000686 | SCOP2 (2022-06-29) |
| X [auth B0] | SCOP2 Family | Ribosomal protein L28 | 8089401 | 4003961 | SCOP2 (2022-06-29) |
| X [auth B0] | SCOP2 Superfamily | L28p-like | 8089402 | 3001966 | SCOP2 (2022-06-29) |
| Y [auth B1] | SCOP2B Superfamily | Ribosomal protein L29 (L29p) | 8076730 | 3000713 | SCOP2B (2022-06-29) |
| Z [auth B2] | SCOP2 Family | Ribosomal protein L30p/L7e | 8076284 | 4001360 | SCOP2 (2022-06-29) |
| Z [auth B2] | SCOP2 Superfamily | Ribosomal protein L30p/L7e | 8076285 | 3001378 | SCOP2 (2022-06-29) |
| AA [auth B3] | SCOP2B Superfamily | L28p-like | 8086124 | 3001966 | SCOP2B (2022-06-29) |
| BA [auth B4] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8081585 | 3001320 | SCOP2B (2022-06-29) |
| CA [auth B5] | SCOP2 Family | Ribosomal protein L33p | 8075069 | 4000511 | SCOP2 (2022-06-29) |
| CA [auth B5] | SCOP2 Superfamily | Zn-binding ribosomal proteins | 8075070 | 3001320 | SCOP2 (2022-06-29) |
| EA [auth B7] | SCOP2 Family | Ribosomal protein L35p | 8083341 | 4003406 | SCOP2 (2022-06-29) |
| EA [auth B7] | SCOP2 Superfamily | L35p-like | 8083342 | 3000790 | SCOP2 (2022-06-29) |
| FA [auth B8] | SCOP2B Superfamily | Ribosomal protein L36 | 8083304 | 3001346 | SCOP2B (2022-06-29) |
| JA [auth BE] | SCOP2B Superfamily | Translational proteins | 8089142 | 3000811 | SCOP2B (2022-06-29) |
| KA [auth BF] | SCOP2B Superfamily | Ribosomal protein L4 | 8080694 | 3001146 | SCOP2B (2022-06-29) |
| LA [auth BG] | SCOP2B Superfamily | RL5-like | 8073858 | 3001709 | SCOP2B (2022-06-29) |
| PA [auth BM] | SCOP2B Superfamily | Ribosomal protein L13 | 8066055 | 3001134 | SCOP2B (2022-06-29) |
| QA [auth BN] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8072020 | 3000433 | SCOP2B (2022-06-29) |
| RA [auth BO] | SCOP2B Superfamily | Ribosomal proteins L15p and L18e | 8070559 | 3001045 | SCOP2B (2022-06-29) |
| SA [auth BP] | SCOP2B Superfamily | Ribosomal protein L16p/L10e | 8076039 | 3000884 | SCOP2B (2022-06-29) |
| TA [auth BQ] | SCOP2B Superfamily | Prokaryotic ribosomal protein L17 | 8089014 | 3000995 | SCOP2B (2022-06-29) |
| VA [auth BS] | SCOP2 Family | Ribosomal protein L19 | 8082418 | 4001761 | SCOP2 (2022-06-29) |
| VA [auth BS] | SCOP2 Superfamily | Translation proteins SH3-like KOW motif containing domain | 8082419 | 3000334 | SCOP2 (2022-06-29) |
| WA [auth BT] | SCOP2B Superfamily | Ribosomal protein L20 | 8075004 | 3000563 | SCOP2B (2022-06-29) |
| XA [auth BU] | SCOP2B Superfamily | l21p-like | 8082437 | 3002005 | SCOP2B (2022-06-29) |
| YA [auth BV] | SCOP2 Family | Ribosomal protein L22 | 8076723 | 4001212 | SCOP2 (2022-06-29) |
| YA [auth BV] | SCOP2 Superfamily | Ribosomal protein L22 | 8076724 | 3001078 | SCOP2 (2022-06-29) |
| ZA [auth BW] | SCOP2 Family | L23p | 8077094 | 4000943 | SCOP2 (2022-06-29) |
| ZA [auth BW] | SCOP2 Superfamily | Ribosomal proteins S24e, L23 and L15e | 8077095 | 3000210 | SCOP2 (2022-06-29) |
| AB [auth BX] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8082505 | 3000334 | SCOP2B (2022-06-29) |
| BB [auth BZ] | SCOP2 Family | Ribosomal L27 protein | 8075027 | 4001900 | SCOP2 (2022-06-29) |
| BB [auth BZ] | SCOP2 Superfamily | Ribosomal L27 protein-like | 8075028 | 3000539 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B [auth AB] | Ribosom_S12_S23 | e3j9wAB1 | A: alpha bundles | X: HTH | H: HTH | T: Three-helical HTH | F: Ribosom_S12_S23 | ECOD (develop294) |
| C [auth AC] | Ribosom_S12_S23 | e3j9wAC1 | A: alpha bundles | X: HTH | H: HTH | T: Three-helical HTH | F: Ribosom_S12_S23 | ECOD (develop294) |
| D [auth AD] | Ribosom_S12_S23 | e3j9wAD1 | A: alpha bundles | X: HTH | H: HTH | T: Three-helical HTH | F: Ribosom_S12_S23 | ECOD (develop294) |
| E [auth AE] | Ribosom_S12_S23 | e3j9wAE1 | A: alpha bundles | X: HTH | H: HTH | T: Three-helical HTH | F: Ribosom_S12_S23 | ECOD (develop294) |
| F [auth AF] | Ribosom_S12_S23 | e3j9wAF1 | A: alpha bundles | X: HTH | H: HTH | T: Three-helical HTH | F: Ribosom_S12_S23 | ECOD (develop294) |
| G [auth AG] | Ribosom_S12_S23 | e3j9wAG1 | A: alpha bundles | X: HTH | H: HTH | T: Three-helical HTH | F: Ribosom_S12_S23 | ECOD (develop294) |
| H [auth AH] | Ribosom_S12_S23 | e3j9wAH1 | A: alpha bundles | X: HTH | H: HTH | T: Three-helical HTH | F: Ribosom_S12_S23 | ECOD (develop294) |
| I [auth AI] | Ribosom_S12_S23 | e3j9wAI1 | A: alpha bundles | X: HTH | H: HTH | T: Three-helical HTH | F: Ribosom_S12_S23 | ECOD (develop294) |
| J [auth AJ] | Ribosom_S12_S23 | e3j9wAJ1 | A: alpha bundles | X: HTH | H: HTH | T: Three-helical HTH | F: Ribosom_S12_S23 | ECOD (develop294) |
| K [auth AK] | Ribosom_S12_S23 | e3j9wAK1 | A: alpha bundles | X: HTH | H: HTH | T: Three-helical HTH | F: Ribosom_S12_S23 | ECOD (develop294) |
| L [auth AL] | Ribosom_S12_S23 | e3j9wAL1 | A: alpha bundles | X: HTH | H: HTH | T: Three-helical HTH | F: Ribosom_S12_S23 | ECOD (develop294) |
| M [auth AM] | Ribosomal_S18 | e3j9wAM1 | A: alpha bundles | X: HTH | H: HTH | T: Three-helical HTH | F: Ribosomal_S18 | ECOD (develop294) |
| N [auth AN] | Ribosomal_S18 | e3j9wAN1 | A: alpha bundles | X: HTH | H: HTH | T: Three-helical HTH | F: Ribosomal_S18 | ECOD (develop294) |
| O [auth AO] | Ribosomal_S18 | e3j9wAO1 | A: alpha bundles | X: HTH | H: HTH | T: Three-helical HTH | F: Ribosomal_S18 | ECOD (develop294) |
| P [auth AP] | Ribosomal_S18 | e3j9wAP1 | A: alpha bundles | X: HTH | H: HTH | T: Three-helical HTH | F: Ribosomal_S18 | ECOD (develop294) |
| Q [auth AQ] | Ribosomal_S18 | e3j9wAQ1 | A: alpha bundles | X: HTH | H: HTH | T: Three-helical HTH | F: Ribosomal_S18 | ECOD (develop294) |
| R [auth AR] | Ribosomal_S18 | e3j9wAR1 | A: alpha bundles | X: HTH | H: HTH | T: Three-helical HTH | F: Ribosomal_S18 | ECOD (develop294) |
| S [auth AS] | Ribosomal_S9 | e3j9wAS1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
| T [auth AT] | Ribosomal_S9 | e3j9wAT1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
| X [auth B0] | Ribosomal_S9 | e3j9wB01 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
| Y [auth B1] | Ribosomal_S9 | e3j9wB11 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
| Z [auth B2] | Ribosomal_S9 | e3j9wB21 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
| AA [auth B3] | Ribosomal_S9 | e3j9wB31 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
| BA [auth B4] | Ribosomal_S9 | e3j9wB41 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
| CA [auth B5] | PemK_toxin | e3j9wB51 | A: alpha bundles | X: SH3 | H: SH3 | T: SH3 | F: PemK_toxin | ECOD (develop294) |
| DA [auth B6] | Ribosomal_S9 | e3j9wB61 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
| EA [auth B7] | Ribosomal_S9 | e3j9wB71 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
| FA [auth B8] | Ribosomal_S9 | e3j9wB81 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
| IA [auth BD] | Ribosomal_S9 | e3j9wBD1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
| JA [auth BE] | PemK_toxin | e3j9wBE1 | A: alpha bundles | X: SH3 | H: SH3 | T: SH3 | F: PemK_toxin | ECOD (develop294) |
| KA [auth BF] | Ribosomal_S9 | e3j9wBF1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
| LA [auth BG] | Ribosomal_S9 | e3j9wBG1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
| MA [auth BH] | Ribosomal_S9 | e3j9wBH1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
| NA [auth BJ] | Ribosomal_S9 | e3j9wBJ1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
| OA [auth BK] | Ribosomal_S9 | e3j9wBK1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
| PA [auth BM] | Ribosomal_S9 | e3j9wBM1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
| QA [auth BN] | Ribosomal_S9 | e3j9wBN1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
| RA [auth BO] | PemK_toxin | e3j9wBO1 | A: alpha bundles | X: SH3 | H: SH3 | T: SH3 | F: PemK_toxin | ECOD (develop294) |
| SA [auth BP] | Ribosomal_S9 | e3j9wBP1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
| TA [auth BQ] | Ribosomal_S9 | e3j9wBQ1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
| UA [auth BR] | Ribosomal_S9 | e3j9wBR1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
| VA [auth BS] | Peptidase_C78 | e3j9wBS1 | A: alpha bundles | X: MocoBD/DmpA-related | H: ferredoxin-like domain in periplasmic region of MacB | T: ferredoxin-like domain in periplasmic region of MacB | F: Peptidase_C78 | ECOD (develop294) |
| WA [auth BT] | PemK_toxin | e3j9wBT1 | A: alpha bundles | X: SH3 | H: SH3 | T: SH3 | F: PemK_toxin | ECOD (develop294) |
| XA [auth BU] | Ribosomal_S9 | e3j9wBU1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
| YA [auth BV] | Ribosomal_S9 | e3j9wBV1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
| ZA [auth BW] | Ribosomal_S9 | e3j9wBW1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
| AB [auth BX] | Ribosomal_S9 | e3j9wBX1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
| BB [auth BZ] | Ribosomal_S9 | e3j9wBZ1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Ribosomal_S9 | ECOD (develop294) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| B [auth AB] | PF00318 | Ribosomal protein S2 (Ribosomal_S2) | Ribosomal protein S2 | - | Family |
| C [auth AC] | PF07650 | KH domain (KH_2) | KH domain | Domain | |
| C [auth AC] | PF00189 | Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C) | Ribosomal protein S3, C-terminal domain | This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. | Domain |
| D [auth AD] | PF00163 | Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4) | Ribosomal protein S4/S9 N-terminal domain | - | Family |
| D [auth AD] | PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain |
| E [auth AE] | PF03719 | Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C) | Ribosomal protein S5, C-terminal domain | Domain | |
| E [auth AE] | PF00333 | Ribosomal protein S5, N-terminal domain (Ribosomal_S5) | Ribosomal protein S5, N-terminal domain | Domain | |
| F [auth AF] | PF01250 | Ribosomal protein S6 (Ribosomal_S6) | Ribosomal protein S6 | Domain | |
| H [auth AH] | PF00410 | Ribosomal protein S8 (Ribosomal_S8) | Ribosomal protein S8 | Domain | |
| I [auth AI] | PF00380 | Ribosomal protein S9/S16 (Ribosomal_S9) | Ribosomal protein S9/S16 | - | Family |
| J [auth AJ] | PF00338 | Ribosomal protein S10p/S20e (Ribosomal_S10) | Ribosomal protein S10p/S20e | This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. | Domain |
| K [auth AK] | PF00411 | Ribosomal protein S11 (Ribosomal_S11) | Ribosomal protein S11 | - | Family |
| L [auth AL] | PF00164 | Ribosomal protein S12/S23 (Ribosom_S12_S23) | Ribosomal protein S12/S23 | This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. | Domain |
| M [auth AM] | PF00416 | Ribosomal protein S13/S18 (Ribosomal_S13) | Ribosomal protein S13/S18 | - | Family |
| N [auth AN] | PF00253 | Ribosomal protein S14p/S29e (Ribosomal_S14) | Ribosomal protein S14p/S29e | - | Family |
| O [auth AO] | PF00312 | Ribosomal protein S15 (Ribosomal_S15) | Ribosomal protein S15 | Domain | |
| P [auth AP] | PF00886 | Ribosomal protein S16 (Ribosomal_S16) | Ribosomal protein S16 | - | Family |
| Q [auth AQ] | PF00366 | Ribosomal protein S17 (Ribosomal_S17) | Ribosomal protein S17 | Domain | |
| R [auth AR] | PF01084 | Ribosomal protein S18 (Ribosomal_S18) | Ribosomal protein S18 | - | Family |
| X [auth B0] | PF00830 | Ribosomal L28 family (Ribosomal_L28) | Ribosomal L28 family | - | Family |
| Y [auth B1] | PF00831 | Ribosomal L29 protein (Ribosomal_L29) | Ribosomal L29 protein | - | Family |
| Z [auth B2] | PF00327 | Ribosomal protein L30p/L7e (Ribosomal_L30) | Ribosomal protein L30p/L7e | This family includes prokaryotic L30 and eukaryotic L7. | Domain |
| AA [auth B3] | PF01197 | Ribosomal protein L31 (Ribosomal_L31) | Ribosomal protein L31 | - | Family |
| BA [auth B4] | PF01783 | Ribosomal L32p protein family (Ribosomal_L32p) | Ribosomal L32p protein family | - | Family |
| CA [auth B5] | PF00471 | Ribosomal protein L33 (Ribosomal_L33) | Ribosomal protein L33 | - | Family |
| DA [auth B6] | PF00468 | Ribosomal protein L34 (Ribosomal_L34) | Ribosomal protein L34 | - | Family |
| EA [auth B7] | PF01632 | Ribosomal protein L35 (Ribosomal_L35p) | Ribosomal protein L35 | - | Family |
| IA [auth BD] | PF03947 | Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C) | Ribosomal Proteins L2, C-terminal domain | Domain | |
| IA [auth BD] | PF00181 | Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N) | Ribosomal Proteins L2, RNA binding N-terminal domain | Domain | |
| JA [auth BE] | PF00297 | Ribosomal protein L3 (Ribosomal_L3) | Ribosomal protein L3 | - | Family |
| KA [auth BF] | PF00573 | Ribosomal protein L4/L1 family (Ribosomal_L4) | Ribosomal protein L4/L1 family | - | Family |
| LA [auth BG] | PF00281 | Ribosomal protein L5 (Ribosomal_L5) | Ribosomal protein L5 | Domain | |
| LA [auth BG] | PF00673 | ribosomal L5P family C-terminus (Ribosomal_L5_C) | ribosomal L5P family C-terminus | This region is found associated with Pfam:PF00281. | Domain |
| MA [auth BH] | PF00347 | Ribosomal protein L6 (Ribosomal_L6) | Ribosomal protein L6 | Domain | |
| OA [auth BK] | PF03946 | Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N) | Ribosomal protein L11, N-terminal domain | The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. | Domain |
| OA [auth BK] | PF00298 | Ribosomal protein L11, RNA binding domain (Ribosomal_L11) | Ribosomal protein L11, RNA binding domain | Domain | |
| PA [auth BM] | PF00572 | Ribosomal protein L13 (Ribosomal_L13) | Ribosomal protein L13 | - | Family |
| QA [auth BN] | PF00238 | Ribosomal protein L14p/L23e (Ribosomal_L14) | Ribosomal protein L14p/L23e | Domain | |
| RA [auth BO] | PF00828 | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A) | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A | This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. | Domain |
| SA [auth BP] | PF00252 | Ribosomal protein L16p/L10e (Ribosomal_L16) | Ribosomal protein L16p/L10e | Domain | |
| TA [auth BQ] | PF01196 | Ribosomal protein L17 (Ribosomal_L17) | Ribosomal protein L17 | - | Family |
| UA [auth BR] | PF00861 | Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p) | Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast | - | Family |
| VA [auth BS] | PF01245 | Ribosomal protein L19 (Ribosomal_L19) | Ribosomal protein L19 | - | Family |
| WA [auth BT] | PF00453 | Ribosomal protein L20 (Ribosomal_L20) | Ribosomal protein L20 | - | Family |
| YA [auth BV] | PF00237 | Ribosomal protein L22p/L17e (Ribosomal_L22) | Ribosomal protein L22p/L17e | This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. | Domain |
| ZA [auth BW] | PF00276 | Ribosomal protein L23 (Ribosomal_L23) | Ribosomal protein L23 | - | Family |
| AB [auth BX] | PF17136 | Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24) | Large ribosomal subunit protein uL24, C-terminal domain | This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ... | Domain |
| AB [auth BX] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |














